Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes HSCB
  • Mouse genes Hscb
  • Rat genes Hscb
  • Zfish genes hscb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Hscb

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	HSCB	IPI	UniProtKB:Q8IWL3	Human	PMID:24606901
Molecular Function	GO:0005515	protein binding	HSCB	IPI	UniProtKB:P38646	Human	PMID:20668094
Molecular Function	GO:0005515	protein binding	HSCB	IPI	UniProtKB:Q9H1K1	Human	PMID:20668094
Molecular Function	GO:0005515	protein binding	HSCB	IPI	UniProtKB:Q9H1K1	Human	PMID:23940031
Molecular Function	GO:0005515	protein binding	HSCB	IPI	UniProtKB:A6NFY7	Human	PMID:24606901
Molecular Function	GO:0005515	protein binding	HSCB	IPI	UniProtKB:P07814	Human	PMID:24606901
Molecular Function	GO:0005515	protein binding	HSCB	IPI	UniProtKB:P13804	Human	PMID:24606901
Molecular Function	GO:0005515	protein binding	HSCB	IPI	UniProtKB:P16083	Human	PMID:24606901
Molecular Function	GO:0005515	protein binding	HSCB	IPI	UniProtKB:P21912	Human	PMID:24606901
Molecular Function	GO:0005515	protein binding	HSCB	IPI	UniProtKB:P38646	Human	PMID:24606901
Molecular Function	GO:0005515	protein binding	HSCB	IPI	UniProtKB:P42694	Human	PMID:24606901
Molecular Function	GO:0005515	protein binding	HSCB	IPI	UniProtKB:Q5U5X0	Human	PMID:24606901
Molecular Function	GO:0005515	protein binding	HSCB	IPI	UniProtKB:Q86SX6	Human	PMID:24606901
Molecular Function	GO:0005515	protein binding	HSCB	IPI	UniProtKB:Q96I99	Human	PMID:24606901
Molecular Function	GO:0005515	protein binding	HSCB	IPI	UniProtKB:Q6RW13	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	HSCB	IPI	UniProtKB:A6NFY7	Human	PMID:26749241
Molecular Function	GO:0005515	protein binding	HSCB	IPI	UniProtKB:P21912	Human	PMID:26749241
Molecular Function	GO:0005515	protein binding	HSCB	IPI	UniProtKB:A6NFY7	Human	PMID:28380382
Molecular Function	GO:0005515	protein binding	HSCB	IPI	UniProtKB:P07814	Human	PMID:28380382
Molecular Function	GO:0005515	protein binding	HSCB	IPI	UniProtKB:P13804	Human	PMID:28380382
Molecular Function	GO:0005515	protein binding	HSCB	IPI	UniProtKB:P19404	Human	PMID:28380382
Molecular Function	GO:0005515	protein binding	HSCB	IPI	UniProtKB:P21912	Human	PMID:28380382
Molecular Function	GO:0005515	protein binding	HSCB	IPI	UniProtKB:P38646	Human	PMID:28380382
Molecular Function	GO:0005515	protein binding	HSCB	IPI	UniProtKB:Q5U5X0	Human	PMID:28380382
Molecular Function	GO:0005515	protein binding	HSCB	IPI	UniProtKB:Q86SX6	Human	PMID:28380382
Molecular Function	GO:0005515	protein binding	HSCB	IPI	UniProtKB:Q96I99	Human	PMID:28380382
Molecular Function	GO:0005515	protein binding	HSCB	IPI	UniProtKB:Q9H1K1-2|UniProtKB:Q9Y697-2	Human	PMID:29309586
Molecular Function	GO:0005515	protein binding	HSCB	IPI	UniProtKB:Q6RW13	Human	PMID:31515488
Cellular Component	GO:0005737	cytoplasm	HSCB	IDA		Human	PMID:20668094
Cellular Component	GO:0005829	cytosol	HSCB	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005739	mitochondrion	HSCB	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005739	mitochondrion	HSCB	IDA		Human	PMID:20668094
Cellular Component	GO:0005739	mitochondrion	Hscb	HDA		Mouse	PMID:18614015
Cellular Component	GO:0005654	nucleoplasm	HSCB	IDA		Human	GO_REF:0000052
Biological Process	GO:0016226	iron-sulfur cluster assembly	HSCB	IMP		Human	PMID:20668094
Biological Process	GO:0060319	primitive erythrocyte differentiation	Hscb	IMP		Mouse	MGI:MGI:6438356|PMID:32634119
Biological Process	GO:0060215	primitive hemopoiesis	Hscb	IMP		Mouse	MGI:MGI:6438356|PMID:32634119

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern