Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes HPF1
  • Mouse genes Hpf1
  • Rat genes Hpf1
  • Zfish genes hpf1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Hpf1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003682	chromatin binding	HPF1	IDA		Human	PMID:32939087
Molecular Function	GO:0008047	enzyme activator activity	HPF1	IDA		Human	PMID:32028527
Molecular Function	GO:0042393	histone binding	HPF1	IDA		Human	PMID:27067600
Molecular Function	GO:0140768	protein ADP-ribosyltransferase-substrate adaptor activity	HPF1	IDA		Human	PMID:28190768
Molecular Function	GO:0140768	protein ADP-ribosyltransferase-substrate adaptor activity	HPF1	IDA		Human	PMID:29480802
Molecular Function	GO:0140768	protein ADP-ribosyltransferase-substrate adaptor activity	HPF1	IDA		Human	PMID:32028527
Molecular Function	GO:0140768	protein ADP-ribosyltransferase-substrate adaptor activity	HPF1	IDA		Human	PMID:32939087
Molecular Function	GO:0140768	protein ADP-ribosyltransferase-substrate adaptor activity	HPF1	IDA		Human	PMID:33186521
Molecular Function	GO:0140768	protein ADP-ribosyltransferase-substrate adaptor activity	HPF1	IDA		Human	PMID:33412112
Molecular Function	GO:0140768	protein ADP-ribosyltransferase-substrate adaptor activity	HPF1	IDA		Human	PMID:33589610
Molecular Function	GO:0140768	protein ADP-ribosyltransferase-substrate adaptor activity	HPF1	IDA		Human	PMID:33683197
Molecular Function	GO:0140768	protein ADP-ribosyltransferase-substrate adaptor activity	HPF1	IDA		Human	PMID:34108479
Molecular Function	GO:0140768	protein ADP-ribosyltransferase-substrate adaptor activity	HPF1	IDA		Human	PMID:34210965
Molecular Function	GO:0140768	protein ADP-ribosyltransferase-substrate adaptor activity	HPF1	IDA		Human	PMID:34486521
Molecular Function	GO:0140768	protein ADP-ribosyltransferase-substrate adaptor activity	HPF1	IDA		Human	PMID:34625544
Molecular Function	GO:0140768	protein ADP-ribosyltransferase-substrate adaptor activity	HPF1	IDA		Human	PMID:34732825
Molecular Function	GO:0140768	protein ADP-ribosyltransferase-substrate adaptor activity	HPF1	IDA		Human	PMID:34795260
Molecular Function	GO:0140768	protein ADP-ribosyltransferase-substrate adaptor activity	HPF1	IDA		Human	PMID:34874266
Molecular Function	GO:0005515	protein binding	HPF1	IPI	UniProtKB:P09874	Human	PMID:27067600
Molecular Function	GO:0005515	protein binding	HPF1	IPI	UniProtKB:Q9UGN5	Human	PMID:27067600
Molecular Function	GO:0005515	protein binding	HPF1	IPI	UniProtKB:P09874	Human	PMID:28190768
Molecular Function	GO:0005515	protein binding	HPF1	IPI	UniProtKB:Q9UGN5	Human	PMID:28190768
Molecular Function	GO:0005515	protein binding	HPF1	IPI	UniProtKB:Q9UGN5	Human	PMID:32939087
Cellular Component	GO:0000785	chromatin	HPF1	IDA		Human	PMID:27067600
Cellular Component	GO:0005634	nucleus	HPF1	IDA		Human	GO_REF:0000054
Cellular Component	GO:0005634	nucleus	HPF1	IDA		Human	PMID:27067600
Cellular Component	GO:0090734	site of DNA damage	HPF1	IDA		Human	PMID:32028527
Cellular Component	GO:0090734	site of DNA damage	HPF1	IDA		Human	PMID:34108479
Cellular Component	GO:0090734	site of DNA damage	HPF1	IDA		Human	PMID:32939087
Biological Process	GO:0006974	DNA damage response	HPF1	IMP		Human	PMID:27067600
Biological Process	GO:0006974	DNA damage response	HPF1	IMP		Human	PMID:29480802
Biological Process	GO:0006281	DNA repair	HPF1	IDA		Human	PMID:32028527
Biological Process	GO:0006281	DNA repair	HPF1	IDA		Human	PMID:34108479
Biological Process	GO:0140861	DNA repair-dependent chromatin remodeling	HPF1	IDA		Human	PMID:32939087
Biological Process	GO:0006302	double-strand break repair	HPF1	IDA		Human	PMID:32028527
Biological Process	GO:0006302	double-strand break repair	HPF1	IDA		Human	PMID:32939087
Biological Process	GO:0031056	regulation of histone modification	HPF1	IDA		Human	PMID:32939087
Biological Process	GO:0010835	regulation of protein ADP-ribosylation	HPF1	IDA		Human	PMID:33186521

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern