Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes HOXB6
  • Mouse genes Hoxb6
  • Rat genes Hoxb6
  • Zfish genes hoxb6a,hoxb6b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Hoxb6

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	HOXB6	IPI	UniProtKB:P49761	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	HOXB6	IPI	UniProtKB:P13807	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HOXB6	IPI	UniProtKB:P49761	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HOXB6	IPI	UniProtKB:P78362	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HOXB6	IPI	UniProtKB:Q96HA8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HOXB6	IPI	UniProtKB:Q96M29	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	HOXB6	IPI	UniProtKB:Q9HC98-4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Hoxb6	IPI	UniProtKB:P41778	Mouse	MGI:MGI:4455093|PMID:20211142
Molecular Function	GO:0005515	protein binding	Hoxb6	IPI	UniProtKB:P41778	Mouse	MGI:MGI:5917381|PMID:22745600
Molecular Function	GO:0003723	RNA binding	HOXB6	HDA		Human	PMID:22681889
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	HOXB6	IDA		Human	PMID:28473536
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb6	IGI	MGI:MGI:96178	Mouse	PMID:17626057
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb6	IGI	MGI:MGI:96184	Mouse	PMID:10885747
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb6	IMP	MGI:MGI:2151485	Mouse	PMID:7828847
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb6	IGI	MGI:MGI:96197	Mouse	PMID:17626057
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb6	IGI	MGI:MGI:96186	Mouse	PMID:7828847
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb6	IGI	MGI:MGI:96190	Mouse	PMID:10885747
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb6	IGI	MGI:MGI:96185	Mouse	PMID:10885747
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb6	IGI	MGI:MGI:96183	Mouse	PMID:10885747
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb6	IGI	MGI:MGI:96182	Mouse	PMID:10885747
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb6	IGI	MGI:MGI:96186	Mouse	PMID:10885747
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb6	IGI	MGI:MGI:96189	Mouse	PMID:10885747
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxb6	IGI	MGI:MGI:96188	Mouse	PMID:10885747
Biological Process	GO:0048706	embryonic skeletal system development	Hoxb6	IGI	MGI:MGI:96197	Mouse	PMID:17626057
Biological Process	GO:0048706	embryonic skeletal system development	Hoxb6	IGI	MGI:MGI:96178	Mouse	PMID:17626057
Biological Process	GO:0048706	embryonic skeletal system development	Hoxb6	IMP	MGI:MGI:2151485	Mouse	PMID:7828847
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Hoxb6	IGI	MGI:MGI:96182	Mouse	PMID:10885747
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Hoxb6	IGI	MGI:MGI:96185	Mouse	PMID:10885747
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Hoxb6	IGI	MGI:MGI:96190	Mouse	PMID:10885747
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Hoxb6	IGI	MGI:MGI:96188	Mouse	PMID:10885747
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Hoxb6	IGI	MGI:MGI:96186	Mouse	PMID:10885747
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Hoxb6	IGI	MGI:MGI:96189	Mouse	PMID:10885747
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Hoxb6	IGI	MGI:MGI:96183	Mouse	PMID:10885747
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Hoxb6	IGI	MGI:MGI:96184	Mouse	PMID:10885747
Biological Process	GO:0034101	erythrocyte homeostasis	Hoxb6	IMP	MGI:MGI:3514269	Mouse	PMID:10996827

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern