Comparative GO Graph (mouse, human, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes HOXA4
  • Mouse genes Hoxa4
  • Rat genes
  • Zfish genes hoxa4a
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Hoxa4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:1990837	sequence-specific double-stranded DNA binding	HOXA4	IDA		Human	PMID:28473536
Cellular Component	GO:0016604	nuclear body	HOXA4	IDA		Human	GO_REF:0000052
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxa4	IMP	MGI:MGI:2150391	Mouse	PMID:7918106
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxa4	IGI	MGI:MGI:96185	Mouse	PMID:7628700
Biological Process	GO:0009952	anterior/posterior pattern specification	Hoxa4	IGI	MGI:MGI:96208	Mouse	PMID:7628700
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Hoxa4	IMP	MGI:MGI:2150391	Mouse	PMID:7918106
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Hoxa4	IGI	MGI:MGI:96185	Mouse	PMID:7628700
Biological Process	GO:0048704	embryonic skeletal system morphogenesis	Hoxa4	IGI	MGI:MGI:96208	Mouse	PMID:7628700
Biological Process	GO:0007275	multicellular organism development	Hoxa4	IDA		Mouse	PMID:11900456

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern