Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes HORMAD2
  • Mouse genes Hormad2
  • Rat genes Hormad2
  • Zfish genes hormad1,zte38
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Hormad2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	HORMAD2	IPI	UniProtKB:O96028	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Hormad2	IPI	UniProtKB:Q9D5T7	Mouse	MGI:MGI:5319701|PMID:22549958
Cellular Component	GO:0005813	centrosome	HORMAD2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005694	chromosome	Hormad2	IDA		Mouse	MGI:MGI:4461385|PMID:19851446
Cellular Component	GO:0005694	chromosome	Hormad2	IDA		Mouse	MGI:MGI:5319701|PMID:22549958
Cellular Component	GO:0005694	chromosome	Hormad2	IDA		Mouse	MGI:MGI:5465514|PMID:23039116
Cellular Component	GO:0005829	cytosol	HORMAD2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	HORMAD2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Hormad2	IDA		Mouse	MGI:MGI:4461385|PMID:19851446
Cellular Component	GO:0000795	synaptonemal complex	Hormad2	IDA		Mouse	PMID:22854038
Biological Process	GO:0051321	meiotic cell cycle	Hormad2	IEP		Mouse	MGI:MGI:4461385|PMID:19851446
Biological Process	GO:0051177	meiotic sister chromatid cohesion	Hormad2	IMP		Mouse	MGI:MGI:5319701|PMID:22549958
Biological Process	GO:0051177	meiotic sister chromatid cohesion	Hormad2	IMP		Mouse	MGI:MGI:5465514|PMID:23039116

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern