Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes HMGN3
  • Mouse genes Hmgn3
  • Rat genes Hmgn3
  • Zfish genes hmgn3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Hmgn3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003682	chromatin binding	Hmgn3	IDA		Mouse	PMID:11356838
Molecular Function	GO:0003682	chromatin binding	Hmgn3	IDA		Mouse	PMID:19651901
Molecular Function	GO:0005515	protein binding	HMGN3	IPI	UniProtKB:C0HLU2	Human	PMID:33468658
Cellular Component	GO:0005829	cytosol	HMGN3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	HMGN3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Hmgn3	IDA		Mouse	PMID:19651901
Cellular Component	GO:0005634	nucleus	Hmgn3	IDA		Mouse	PMID:15082770
Cellular Component	GO:0005634	nucleus	Hmgn3	IDA		Mouse	PMID:19885867
Biological Process	GO:0051091	positive regulation of DNA-binding transcription factor activity	Hmgn3	IDA		Mouse	PMID:19651901
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Hmgn3	IMP	MGI:MGI:4366465	Mouse	PMID:19651901
Biological Process	GO:0061178	regulation of insulin secretion involved in cellular response to glucose stimulus	Hmgn3	IMP	MGI:MGI:4366465	Mouse	PMID:19651901
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	Hmgn3	IMP	MGI:MGI:4366465	Mouse	PMID:21278158
Biological Process	GO:0006366	transcription by RNA polymerase II	Hmgn3	IMP	MGI:MGI:4366465	Mouse	PMID:19651901

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern