Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes HMGN2
  • Mouse genes Hmgn2
  • Rat genes Hmgn2
  • Zfish genes hmgn2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Hmgn2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0060090	molecular adaptor activity	HMGN2	EXP		Human	PMID:565710
Molecular Function	GO:0003676	nucleic acid binding	HMGN2	EXP		Human	PMID:565710
Molecular Function	GO:0005515	protein binding	HMGN2	IPI	UniProtKB:Q15554	Human	PMID:21044950
Molecular Function	GO:0003723	RNA binding	HMGN2	HDA		Human	PMID:22681889
Cellular Component	GO:0005737	cytoplasm	HMGN2	IDA		Human	PMID:16204630
Cellular Component	GO:0005615	extracellular space	HMGN2	IDA		Human	PMID:16204630
Cellular Component	GO:0001674	female germ cell nucleus	Hmgn2	IDA		Mouse	PMID:11133167
Cellular Component	GO:0005634	nucleus	HMGN2	IDA		Human	PMID:16204630
Biological Process	GO:0061844	antimicrobial humoral immune response mediated by antimicrobial peptide	HMGN2	IMP		Human	PMID:16204630
Biological Process	GO:0031640	killing of cells of another organism	HMGN2	IMP		Human	PMID:16204630
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Hmgn2	IMP	MGI:MGI:5546373	Mouse	PMID:23975681
Biological Process	GO:0040034	regulation of development, heterochronic	Hmgn2	IGI	MGI:MGI:96120	Mouse	PMID:11133167
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	Hmgn2	IMP	MGI:MGI:5317455	Mouse	PMID:21278158

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern