Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes HADHB
  • Mouse genes Hadhb
  • Rat genes Hadhb
  • Zfish genes hadhb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Hadhb

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003985	acetyl-CoA C-acetyltransferase activity	Hadhb	IDA		Mouse	PMID:32513690
Molecular Function	GO:0003988	acetyl-CoA C-acyltransferase activity	Hadhb	IDA		Mouse	PMID:15240869
Molecular Function	GO:0003988	acetyl-CoA C-acyltransferase activity	Hadhb	IMP	MGI:MGI:3698125	Mouse	PMID:17116638
Molecular Function	GO:0003988	acetyl-CoA C-acyltransferase activity	Hadhb	IDA		Rat	PMID:1730633|RGD:1600572
Molecular Function	GO:0106222	lncRNA binding	Hadhb	IDA		Mouse	PMID:32513690
Molecular Function	GO:0005515	protein binding	HADHB	IPI	UniProtKB:Q9H0R8	Human	PMID:20562859
Molecular Function	GO:0005515	protein binding	HADHB	IPI	UniProtKB:Q8CBB9	Human	PMID:21527675
Molecular Function	GO:0005515	protein binding	HADHB	IPI	UniProtKB:Q8WXG1	Human	PMID:21527675
Molecular Function	GO:0005515	protein binding	HADHB	IPI	UniProtKB:P40939	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	HADHB	IPI	UniProtKB:P40939	Human	PMID:29915090
Molecular Function	GO:0005515	protein binding	HADHB	IPI	UniProtKB:P40939	Human	PMID:30850536
Molecular Function	GO:0005515	protein binding	HADHB	IPI	UniProtKB:Q8NCU8	Human	PMID:32243843
Molecular Function	GO:0005515	protein binding	Hadhb	IPI	UniProtKB:Q8BT35	Mouse	MGI:MGI:6278482|PMID:29949755
Molecular Function	GO:0044877	protein-containing complex binding	Hadhb	IMP		Rat	PMID:20132223|RGD:5688153
Molecular Function	GO:0003723	RNA binding	HADHB	HDA		Human	PMID:22658674
Cellular Component	GO:0005783	endoplasmic reticulum	HADHB	IDA		Human	PMID:21527675
Cellular Component	GO:0016507	mitochondrial fatty acid beta-oxidation multienzyme complex	HADHB	IPI		Human	PMID:29915090
Cellular Component	GO:0016507	mitochondrial fatty acid beta-oxidation multienzyme complex	Hadhb	IDA		Rat	PMID:1730633|RGD:1600572
Cellular Component	GO:0005743	mitochondrial inner membrane	HADHB	IDA		Human	PMID:21527675
Cellular Component	GO:0005743	mitochondrial inner membrane	HADHB	IDA		Human	PMID:29915090
Cellular Component	GO:0005743	mitochondrial inner membrane	Hadhb	HDA		Mouse	PMID:12865426
Cellular Component	GO:0042645	mitochondrial nucleoid	HADHB	IDA		Human	PMID:18063578
Cellular Component	GO:0005741	mitochondrial outer membrane	HADHB	IDA		Human	PMID:21527675
Cellular Component	GO:0005739	mitochondrion	HADHB	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005739	mitochondrion	Hadhb	IDA		Mouse	PMID:32513690
Cellular Component	GO:0005739	mitochondrion	Hadhb	HDA		Mouse	PMID:14651853
Cellular Component	GO:0005739	mitochondrion	Hadhb	HDA		Mouse	PMID:18614015
Cellular Component	GO:0005739	mitochondrion	Hadhb	IMP	MGI:MGI:3698125	Mouse	PMID:17116638
Cellular Component	GO:0005739	mitochondrion	Hadhb	IDA		Rat	PMID:1730633|RGD:1600572
Biological Process	GO:0071222	cellular response to lipopolysaccharide	Hadhb	IDA		Mouse	PMID:32513690
Biological Process	GO:0006635	fatty acid beta-oxidation	HADHB	IDA		Human	PMID:29915090
Biological Process	GO:0006635	fatty acid beta-oxidation	Hadhb	IDA		Rat	PMID:1730633|RGD:1600572
Biological Process	GO:0010467	gene expression	Hadhb	IMP		Mouse	PMID:32513690

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern