Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes H1-6
  • Mouse genes H1f6
  • Rat genes H1f6
  • Zfish genes histh1l1,histh1l2,histh1l3,si:ch211-103n10.5,si:ch211-113a14.18,si:ch211-113a14.24,si:ch73-368j24.11,si:dkey-108k21.10,si:dkey-108k21.21,si:dkey-23a13.17,si:dkey-261m9.12,zgc:110216,zgc:110425,zgc:153405,zgc:163061
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set H1f6

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003677	DNA binding	H1f6	IDA		Mouse	PMID:15562002
Molecular Function	GO:0003690	double-stranded DNA binding	H1f6	IMP		Mouse	MGI:MGI:5882893|PMID:16006555
Cellular Component	GO:0000794	condensed nuclear chromosome	H1f6	IDA		Mouse	PMID:18316482
Cellular Component	GO:0005622	intracellular anatomical structure	H1f6	IDA		Mouse	PMID:18283110
Cellular Component	GO:0005634	nucleus	H1-6	HDA		Human	PMID:21630459
Biological Process	GO:0007339	binding of sperm to zona pellucida	H1f6	IGI	MGI:MGI:96945	Mouse	PMID:15685642
Biological Process	GO:0007339	binding of sperm to zona pellucida	H1f6	IGI	MGI:MGI:87884	Mouse	PMID:15685642
Biological Process	GO:0007339	binding of sperm to zona pellucida	H1f6	IGI	MGI:MGI:98785	Mouse	PMID:15685642
Biological Process	GO:0030317	flagellated sperm motility	H1f6	IGI	MGI:MGI:98785	Mouse	PMID:15685642
Biological Process	GO:0030317	flagellated sperm motility	H1f6	IGI	MGI:MGI:87884	Mouse	PMID:15685642
Biological Process	GO:0030317	flagellated sperm motility	H1f6	IGI	MGI:MGI:96945	Mouse	PMID:15685642
Biological Process	GO:0007283	spermatogenesis	H1f6	IGI	MGI:MGI:96945	Mouse	PMID:15051954
Biological Process	GO:0007283	spermatogenesis	H1f6	IEP		Rat	PMID:12297531|RGD:632863

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern