Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GYPC
  • Mouse genes Gypc
  • Rat genes Gypc
  • Zfish genes gypc
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Gypc

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	GYPC	IPI	UniProtKB:P11171	Human	PMID:16669616
Molecular Function	GO:0005515	protein binding	GYPC	IPI	UniProtKB:O15529	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GYPC	IPI	UniProtKB:O95858	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GYPC	IPI	UniProtKB:O95870	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GYPC	IPI	UniProtKB:Q13520	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GYPC	IPI	UniProtKB:Q3KNW5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GYPC	IPI	UniProtKB:Q3SXP7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GYPC	IPI	UniProtKB:Q6PEY1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GYPC	IPI	UniProtKB:Q8TEB9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GYPC	IPI	UniProtKB:Q96GM1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GYPC	IPI	UniProtKB:Q9NUH8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	gypc	IPI	ZFIN:ZDB-GENE-030130-1	Zfish	PMID:17569566
Cellular Component	GO:0030863	cortical cytoskeleton	GYPC	IDA		Human	PMID:16669616
Cellular Component	GO:0030863	cortical cytoskeleton	Gypc	IDA		Mouse	PMID:18723693
Cellular Component	GO:0016020	membrane	GYPC	HDA		Human	PMID:19946888
Cellular Component	GO:0016020	membrane	Gypc	IDA		Mouse	PMID:18723693
Cellular Component	GO:0005886	plasma membrane	GYPC	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	gypc	IDA		Zfish	PMID:17569566

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern