Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GTF2F1
  • Mouse genes Gtf2f1
  • Rat genes Gtf2f1
  • Zfish genes gtf2f1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Gtf2f1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0019211	phosphatase activator activity	GTF2F1	IDA		Human	PMID:12721286
Molecular Function	GO:1990841	promoter-specific chromatin binding	GTF2F1	IDA		Human	PMID:24441171
Molecular Function	GO:0005515	protein binding	GTF2F1	IPI	UniProtKB:P13984	Human	PMID:11183778
Molecular Function	GO:0005515	protein binding	GTF2F1	IPI	UniProtKB:Q9GZU7	Human	PMID:12721286
Molecular Function	GO:0005515	protein binding	GTF2F1	IPI	UniProtKB:Q9Y5B0	Human	PMID:12732728
Molecular Function	GO:0005515	protein binding	GTF2F1	IPI	UniProtKB:O94763	Human	PMID:12737519
Molecular Function	GO:0005515	protein binding	GTF2F1	IPI	UniProtKB:Q00403	Human	PMID:12931194
Molecular Function	GO:0005515	protein binding	GTF2F1	IPI	UniProtKB:P13984	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	GTF2F1	IPI	UniProtKB:P13984	Human	PMID:31467278
Molecular Function	GO:0005515	protein binding	GTF2F1	IPI	UniProtKB:P21675	Human	PMID:7590250
Molecular Function	GO:0005515	protein binding	GTF2F1	IPI	UniProtKB:P49848-1	Human	PMID:7667268
Molecular Function	GO:0005515	protein binding	GTF2F1	IPI	UniProtKB:P11831	Human	PMID:7854423
Molecular Function	GO:0005515	protein binding	GTF2F1	IPI	UniProtKB:P13984	Human	PMID:7854423
Molecular Function	GO:0005515	protein binding	GTF2F1	IPI	UniProtKB:P13984	Human	PMID:8662660
Molecular Function	GO:0005515	protein binding	GTF2F1	IPI	UniProtKB:Q00403	Human	PMID:8662660
Molecular Function	GO:0005515	protein binding	GTF2F1	IPI	UniProtKB:Q9Y5B0	Human	PMID:9765293
Molecular Function	GO:0005515	protein binding	Gtf2f1	IPI	PR:Q03358	Mouse	PMID:9265625
Molecular Function	GO:0005515	protein binding	Gtf2f1	IPI	RGD:3428	Rat	PMID:11118327|RGD:9681443
Molecular Function	GO:0019904	protein domain specific binding	GTF2F1	IPI	UniProtKB:Q9Y5B0	Human	PMID:15723517
Molecular Function	GO:0019903	protein phosphatase binding	GTF2F1	IPI	UniProtKB:Q9Y5B0	Human	PMID:12732728
Molecular Function	GO:0003723	RNA binding	GTF2F1	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	GTF2F1	HDA		Human	PMID:22681889
Molecular Function	GO:0016251	RNA polymerase II general transcription initiation factor activity	GTF2F1	IDA		Human	PMID:27193682
Molecular Function	GO:0016251	RNA polymerase II general transcription initiation factor activity	GTF2F1	IDA		Human	PMID:7929273
Molecular Function	GO:0001091	RNA polymerase II general transcription initiation factor binding	GTF2F1	IPI	UniProtKB:P21675	Human	PMID:8625415
Cellular Component	GO:0030054	cell junction	GTF2F1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	GTF2F1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	GTF2F1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	GTF2F1	IMP		Human	PMID:15723517
Cellular Component	GO:0032991	protein-containing complex	GTF2F1	IMP		Human	PMID:12732728
Cellular Component	GO:0005669	transcription factor TFIID complex	GTF2F1	IDA		Human	PMID:27193682
Cellular Component	GO:0005674	transcription factor TFIIF complex	GTF2F1	IPI		Human	PMID:11183778
Biological Process	GO:0032091	negative regulation of protein binding	GTF2F1	IMP		Human	PMID:8662660
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	GTF2F1	IDA		Human	PMID:15351637
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	GTF2F1	IMP		Human	PMID:8662660
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Gtf2f1	IDA		Mouse	PMID:9265625
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Gtf2f1	IDA		Rat	PMID:1429731|RGD:632949
Biological Process	GO:0009615	response to virus	GTF2F1	IEP		Human	PMID:16548883
Biological Process	GO:0006368	transcription elongation by RNA polymerase II	GTF2F1	IDA		Human	PMID:15351637
Biological Process	GO:0006367	transcription initiation at RNA polymerase II promoter	GTF2F1	IDA		Human	PMID:15351637
Biological Process	GO:0006367	transcription initiation at RNA polymerase II promoter	GTF2F1	IDA		Human	PMID:7929273

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern