Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GTF2E2
  • Mouse genes Gtf2e2
  • Rat genes Gtf2e2
  • Zfish genes gtf2e2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Gtf2e2

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	GTF2E2	IPI	UniProtKB:P29083	Human	PMID:16547462
Molecular Function	GO:0005515	protein binding	GTF2E2	IPI	UniProtKB:P23508	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	GTF2E2	IPI	UniProtKB:P29083	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	GTF2E2	IPI	UniProtKB:P29083	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GTF2E2	IPI	UniProtKB:Q8IYI6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GTF2E2	IPI	UniProtKB:Q92993	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GTF2E2	IPI	UniProtKB:Q9NRD5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GTF2E2	IPI	UniProtKB:P19447	Human	PMID:7926747
Molecular Function	GO:0005515	protein binding	GTF2E2	IPI	UniProtKB:Q03468	Human	PMID:8999876
Molecular Function	GO:0005515	protein binding	GTF2E2	IPI	UniProtKB:Q00987	Human	PMID:9271120
Molecular Function	GO:0005515	protein binding	Gtf2e2	IPI	UniProtKB:Q7TNS8	Mouse	MGI:MGI:5507920|PMID:23180766
Molecular Function	GO:0005515	protein binding	Gtf2e2	IPI	PR:Q9DBS8	Mouse	PMID:11591653
Molecular Function	GO:0003723	RNA binding	GTF2E2	HDA		Human	PMID:22658674
Molecular Function	GO:0016251	RNA polymerase II general transcription initiation factor activity	GTF2E2	IDA		Human	PMID:27193682
Cellular Component	GO:0005829	cytosol	GTF2E2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016607	nuclear speck	GTF2E2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	GTF2E2	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005669	transcription factor TFIID complex	GTF2E2	IDA		Human	PMID:27193682
Biological Process	GO:0006366	transcription by RNA polymerase II	GTF2E2	IDA		Human	PMID:27193682

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern