Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GMPPB
  • Mouse genes Gmppb
  • Rat genes Gmppb
  • Zfish genes gmppb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Gmppb

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	GMPPB	IPI	UniProtKB:Q96IJ6	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	GMPPB	IPI	UniProtKB:Q86UY0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GMPPB	IPI	UniProtKB:Q96IJ6	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GMPPB	IPI	UniProtKB:Q96IJ6	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	GMPPB	IPI	UniProtKB:O15160	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GMPPB	IPI	UniProtKB:Q7L190	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GMPPB	IPI	UniProtKB:Q8IVS8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	GMPPB	IPI	UniProtKB:Q96IJ6	Human	PMID:32296183
Cellular Component	GO:0005737	cytoplasm	GMPPB	IDA		Human	PMID:23768512
Cellular Component	GO:0005739	mitochondrion	Gmppb	HDA		Mouse	PMID:18614015
Biological Process	GO:0009298	GDP-mannose biosynthetic process	GMPPB	IMP		Human	PMID:26310427
Biological Process	GO:0055001	muscle cell development	gmppb	IMP	ZFIN:ZDB-MRPHLNO-130828-1	Zfish	PMID:23768512
Biological Process	GO:0048666	neuron development	gmppb	IMP	ZFIN:ZDB-MRPHLNO-130828-1	Zfish	PMID:35006422
Biological Process	GO:0006486	protein glycosylation	gmppb	IMP	ZFIN:ZDB-MRPHLNO-130828-1	Zfish	PMID:23768512
Biological Process	GO:0007519	skeletal muscle tissue development	gmppb	IMP	ZFIN:ZDB-MRPHLNO-130828-1	Zfish	PMID:35006422

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern