Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GLYR1
  • Mouse genes Glyr1
  • Rat genes Glyr1
  • Zfish genes glyr1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Glyr1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003682	chromatin binding	GLYR1	IDA		Human	PMID:29759984
Molecular Function	GO:0003682	chromatin binding	Glyr1	IDA		Mouse	MGI:MGI:6284149|PMID:29759984
Molecular Function	GO:0140463	chromatin-protein adaptor activity	GLYR1	IDA		Human	PMID:30970244
Molecular Function	GO:0003677	DNA binding	GLYR1	IDA		Human	PMID:29759984
Molecular Function	GO:0003677	DNA binding	Glyr1	IDA		Mouse	MGI:MGI:6284149|PMID:29759984
Molecular Function	GO:0042393	histone binding	GLYR1	IDA		Human	PMID:23260659
Molecular Function	GO:0035064	methylated histone binding	GLYR1	IDA		Human	PMID:20850016
Molecular Function	GO:0031491	nucleosome binding	GLYR1	IDA		Human	PMID:29759984
Molecular Function	GO:0005515	protein binding	GLYR1	IPI	UniProtKB:Q8NB78	Human	PMID:23260659
Molecular Function	GO:0005515	protein binding	GLYR1	IPI	UniProtKB:P24863	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GLYR1	IPI	UniProtKB:Q14192	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GLYR1	IPI	UniProtKB:Q8IYR0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GLYR1	IPI	UniProtKB:Q8N9N8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GLYR1	IPI	UniProtKB:Q14192	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	GLYR1	IPI	UniProtKB:Q8N9N8	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	GLYR1	IPI	UniProtKB:P43694	Human	PMID:35182466
Cellular Component	GO:0000785	chromatin	GLYR1	IDA		Human	PMID:30970244
Cellular Component	GO:0005829	cytosol	GLYR1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	GLYR1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0000786	nucleosome	GLYR1	IDA		Human	PMID:23260659
Biological Process	GO:0035066	positive regulation of histone acetylation	GLYR1	IDA		Human	PMID:29759984
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	GLYR1	IDA		Human	PMID:29759984
Biological Process	GO:0045815	transcription initiation-coupled chromatin remodeling	GLYR1	IDA		Human	PMID:30970244

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern