Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes GDPD5
  • Mouse genes Gdpd5
  • Rat genes Gdpd5
  • Zfish genes gdpd5a,gdpd5b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Gdpd5

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0047389	glycerophosphocholine phosphodiesterase activity	Gdpd5	IDA		Mouse	MGI:MGI:5619476|PMID:18667693
Molecular Function	GO:0047389	glycerophosphocholine phosphodiesterase activity	Gdpd5	EXP		Mouse	MGI:MGI:5619476|PMID:18667693
Molecular Function	GO:0005515	protein binding	GDPD5	IPI	UniProtKB:P50542	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	GDPD5	IPI	UniProtKB:Q8IUQ4	Human	PMID:25416956
Cellular Component	GO:0030424	axon	Gdpd5	IDA		Mouse	MGI:MGI:5299268|PMID:21943603
Cellular Component	GO:0016020	membrane	Gdpd5	IDA		Mouse	PMID:17275818
Cellular Component	GO:0043025	neuronal cell body	Gdpd5	IDA		Mouse	MGI:MGI:5299268|PMID:21943603
Cellular Component	GO:0097038	perinuclear endoplasmic reticulum	Gdpd5	IDA		Mouse	MGI:MGI:5619476|PMID:18667693
Cellular Component	GO:0005886	plasma membrane	gdpd5b	IDA		Zfish	PMID:29203233
Cellular Component	GO:0005886	plasma membrane	gdpd5a	IDA		Zfish	PMID:29203233
Biological Process	GO:0003401	axis elongation	gdpd5b	IMP	ZFIN:ZDB-MRPHLNO-180510-2	Zfish	PMID:29203233
Biological Process	GO:0021895	cerebral cortex neuron differentiation	Gdpd5	IMP	MGI:MGI:5302017	Mouse	PMID:22951639
Biological Process	GO:0035188	hatching	gdpd5a	IMP	ZFIN:ZDB-MRPHLNO-180510-1	Zfish	PMID:29203233
Biological Process	GO:0045746	negative regulation of Notch signaling pathway	Gdpd5	IDA		Mouse	MGI:MGI:5299268|PMID:21943603
Biological Process	GO:0045746	negative regulation of Notch signaling pathway	Gdpd5	IMP	MGI:MGI:5302017	Mouse	PMID:22951639
Biological Process	GO:0045746	negative regulation of Notch signaling pathway	Gdpd5	IMP	MGI:MGI:5302017	Mouse	PMID:21943603
Biological Process	GO:0030182	neuron differentiation	Gdpd5	IMP	MGI:MGI:5302017	Mouse	PMID:23329048
Biological Process	GO:0031175	neuron projection development	Gdpd5	IMP		Mouse	PMID:17275818
Biological Process	GO:0007219	Notch signaling pathway	Gdpd5	IMP	MGI:MGI:5302017	Mouse	PMID:21943603
Biological Process	GO:0045787	positive regulation of cell cycle	Gdpd5	IMP		Mouse	MGI:MGI:5299268|PMID:21943603
Biological Process	GO:0045666	positive regulation of neuron differentiation	Gdpd5	IMP		Mouse	MGI:MGI:5299268|PMID:21943603
Biological Process	GO:0045666	positive regulation of neuron differentiation	Gdpd5	IMP	MGI:MGI:5302017	Mouse	PMID:23329048
Biological Process	GO:0048505	regulation of timing of cell differentiation	Gdpd5	IMP	MGI:MGI:5302017	Mouse	PMID:22951639
Biological Process	GO:0021522	spinal cord motor neuron differentiation	Gdpd5	IMP	MGI:MGI:5302017	Mouse	PMID:21943603
Biological Process	GO:0036269	swimming behavior	gdpd5a	IMP	ZFIN:ZDB-MRPHLNO-180510-1	Zfish	PMID:29203233

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern