Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes FOXR1
  • Mouse genes Foxr1
  • Rat genes Foxr1
  • Zfish genes foxr1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Foxr1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	FOXR1	IDA		Human	PMID:34723967
Molecular Function	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	FOXR1	IDA		Human	PMID:34723967
Molecular Function	GO:0005515	protein binding	FOXR1	IPI	UniProtKB:P50222	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	FOXR1	IPI	UniProtKB:Q53SE7	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	FOXR1	IPI	UniProtKB:Q8N9N5	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	FOXR1	IPI	UniProtKB:Q96CD2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	FOXR1	IPI	UniProtKB:Q96CD2	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	FOXR1	IPI	UniProtKB:Q7L190	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FOXR1	IPI	UniProtKB:Q8N9N5-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FOXR1	IPI	UniProtKB:Q96CD2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FOXR1	IPI	UniProtKB:Q96IK5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FOXR1	IPI	UniProtKB:Q96LK0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FOXR1	IPI	UniProtKB:D3DTS7	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	FOXR1	IPI	UniProtKB:G5E9A7	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	FOXR1	IPI	UniProtKB:O14656-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	FOXR1	IPI	UniProtKB:P01023	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	FOXR1	IPI	UniProtKB:P37840	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	FOXR1	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	FOXR1	IPI	UniProtKB:P50570-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	FOXR1	IPI	UniProtKB:P51608	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	FOXR1	IPI	UniProtKB:Q16637	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	FOXR1	IPI	UniProtKB:Q7Z412	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	FOXR1	IPI	UniProtKB:Q86WV8	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	FOXR1	IPI	UniProtKB:Q8TB36	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	FOXR1	IPI	UniProtKB:Q92870-2	Human	PMID:32814053
Cellular Component	GO:0005737	cytoplasm	FOXR1	IDA		Human	PMID:34723967
Cellular Component	GO:0005634	nucleus	FOXR1	IDA		Human	PMID:34723967
Biological Process	GO:0007420	brain development	Foxr1	IMP		Mouse	MGI:MGI:6792271|PMID:34723967
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	FOXR1	IDA		Human	PMID:34723967
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	FOXR1	IDA		Human	PMID:34723967

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern