Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes FBLIM1
  • Mouse genes Fblim1
  • Rat genes Fblim1
  • Zfish genes fblim1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Fblim1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0031005	filamin binding	FBLIM1	IDA		Human	PMID:19074766
Molecular Function	GO:0005515	protein binding	FBLIM1	IPI	UniProtKB:P21333	Human	PMID:19828450
Molecular Function	GO:0005515	protein binding	FBLIM1	IPI	UniProtKB:P21333	Human	PMID:21524097
Molecular Function	GO:0005515	protein binding	FBLIM1	IPI	UniProtKB:O60888	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	FBLIM1	IPI	UniProtKB:P68431	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	FBLIM1	IPI	UniProtKB:Q8TAP4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	FBLIM1	IPI	UniProtKB:O60888	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	FBLIM1	IPI	UniProtKB:Q8TAP4	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	FBLIM1	IPI	UniProtKB:O60888-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FBLIM1	IPI	UniProtKB:Q5BKX5-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FBLIM1	IPI	UniProtKB:Q6NXT2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FBLIM1	IPI	UniProtKB:Q6ZSJ9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FBLIM1	IPI	UniProtKB:Q8TAP4-4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	FBLIM1	IPI	UniProtKB:Q96EY9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Fblim1	IPI	UniProtKB:P52952	Mouse	MGI:MGI:6368079|PMID:14757752
Cellular Component	GO:0030054	cell junction	FBLIM1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0071944	cell periphery	FBLIM1	IDA		Human	PMID:18528435
Cellular Component	GO:0005737	cytoplasm	FBLIM1	IDA		Human	PMID:18528435
Cellular Component	GO:0001650	fibrillar center	FBLIM1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005925	focal adhesion	FBLIM1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005925	focal adhesion	FBLIM1	HDA		Human	PMID:21423176
Cellular Component	GO:0005925	focal adhesion	FBLIM1	IDA		Human	PMID:18528435
Cellular Component	GO:0001725	stress fiber	FBLIM1	IDA		Human	PMID:18829455
Biological Process	GO:0098609	cell-cell adhesion	FBLIM1	IMP		Human	PMID:19074766
Biological Process	GO:0033623	regulation of integrin activation	FBLIM1	IMP		Human	PMID:19074766

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern