Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes FARP1
  • Mouse genes Farp1
  • Rat genes Farp1
  • Zfish genes farp1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Farp1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005085	guanyl-nucleotide exchange factor activity	Farp1	IMP		Rat	PMID:23209303|RGD:8554251
Molecular Function	GO:0005515	protein binding	FARP1	IPI	UniProtKB:Q9NWS0	Human	PMID:32296183
Molecular Function	GO:0031267	small GTPase binding	Farp1	IPI	UniProtKB:P63000	Rat	PMID:23209303|RGD:8554251
Cellular Component	GO:0005829	cytosol	Farp1	IDA		Rat	PMID:23209303|RGD:8554251
Cellular Component	GO:0030425	dendrite	Farp1	IDA		Rat	PMID:23209303|RGD:8554251
Cellular Component	GO:0031234	extrinsic component of cytoplasmic side of plasma membrane	Farp1	IDA		Rat	PMID:23209303|RGD:8554251
Cellular Component	GO:0098890	extrinsic component of postsynaptic membrane	Farp1	IDA		Rat	PMID:23209303|RGD:8554251
Cellular Component	GO:0098890	extrinsic component of postsynaptic membrane	Farp1	IMP		Rat	PMID:23209303|RGD:8554251
Cellular Component	GO:0098978	glutamatergic synapse	Farp1	IDA		Rat	PMID:23209303|RGD:8554251
Cellular Component	GO:0098978	glutamatergic synapse	Farp1	IMP		Rat	PMID:23209303|RGD:8554251
Biological Process	GO:0048813	dendrite morphogenesis	Farp1	IMP		Rat	PMID:23209303|RGD:8554251
Biological Process	GO:0003094	glomerular filtration	farp1	IMP	ZFIN:ZDB-MRPHLNO-180925-1	Zfish	PMID:29791858
Biological Process	GO:0098974	postsynaptic actin cytoskeleton organization	Farp1	IDA		Rat	PMID:23209303|RGD:8554251
Biological Process	GO:0098974	postsynaptic actin cytoskeleton organization	Farp1	IMP		Rat	PMID:23209303|RGD:8554251
Biological Process	GO:1905606	regulation of presynapse assembly	Farp1	IDA		Rat	PMID:23209303|RGD:8554251
Biological Process	GO:1905606	regulation of presynapse assembly	Farp1	IMP		Rat	PMID:23209303|RGD:8554251
Biological Process	GO:0098942	retrograde trans-synaptic signaling by trans-synaptic protein complex	Farp1	IDA		Rat	PMID:23209303|RGD:8554251
Biological Process	GO:0098942	retrograde trans-synaptic signaling by trans-synaptic protein complex	Farp1	IMP		Rat	PMID:23209303|RGD:8554251
Biological Process	GO:0007416	synapse assembly	Farp1	IMP		Rat	PMID:23209303|RGD:8554251

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern