Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes FANK1
  • Mouse genes Fank1
  • Rat genes Fank1
  • Zfish genes fank1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Fank1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	FANK1	IPI	UniProtKB:Q92905	Human	PMID:20978819
Molecular Function	GO:0005515	protein binding	FANK1	IPI	UniProtKB:Q8N488	Human	PMID:27060496
Molecular Function	GO:0005515	protein binding	FANK1	IPI	UniProtKB:O60333-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	FANK1	IPI	UniProtKB:O76024	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	FANK1	IPI	UniProtKB:P04792	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	FANK1	IPI	UniProtKB:P07196	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	FANK1	IPI	UniProtKB:P22607	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	FANK1	IPI	UniProtKB:P42858	Human	PMID:32814053
Cellular Component	GO:0000785	chromatin	FANK1	IDA		Human	PMID:20978819
Cellular Component	GO:0036064	ciliary basal body	Fank1	IDA		Mouse	MGI:MGI:5883143|PMID:27914912
Cellular Component	GO:0097546	ciliary base	Fank1	IDA		Mouse	PMID:27914912
Cellular Component	GO:0005929	cilium	Fank1	IDA		Mouse	MGI:MGI:5883143|PMID:27914912
Cellular Component	GO:0005737	cytoplasm	FANK1	IDA		Human	PMID:27060496
Cellular Component	GO:0005829	cytosol	FANK1	IDA		Human	PMID:20978819
Cellular Component	GO:0005654	nucleoplasm	FANK1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	FANK1	IDA		Human	PMID:20978819
Cellular Component	GO:0005634	nucleus	FANK1	IDA		Human	PMID:27060496
Cellular Component	GO:0005634	nucleus	fank1	IDA		Zfish	PMID:25139857
Biological Process	GO:0043066	negative regulation of apoptotic process	FANK1	IMP		Human	PMID:20978819
Biological Process	GO:0043065	positive regulation of apoptotic process	FANK1	IMP		Human	PMID:27060496
Biological Process	GO:0051091	positive regulation of DNA-binding transcription factor activity	FANK1	IMP		Human	PMID:20978819
Biological Process	GO:0045893	positive regulation of DNA-templated transcription	FANK1	IMP		Human	PMID:27060496

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern