Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ERI1
  • Mouse genes Eri1
  • Rat genes Eri1
  • Zfish genes eri1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Eri1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008408	3'-5' exonuclease activity	ERI1	IDA		Human	PMID:14536070
Molecular Function	GO:0008408	3'-5' exonuclease activity	ERI1	IDA		Human	PMID:16912046
Molecular Function	GO:0071207	histone pre-mRNA stem-loop binding	Eri1	IDA		Mouse	MGI:MGI:4353869|PMID:19470752
Molecular Function	GO:0005515	protein binding	ERI1	IPI	UniProtKB:Q14493	Human	PMID:23329046
Molecular Function	GO:0005515	protein binding	ERI1	IPI	UniProtKB:A9UHW6	Human	PMID:23804756
Molecular Function	GO:0005515	protein binding	Eri1	IPI	UniProtKB:Q8VC85|UniProtKB:Q9EPU0	Mouse	MGI:MGI:5925577|PMID:23202588
Molecular Function	GO:0043022	ribosome binding	Eri1	IDA		Mouse	MGI:MGI:3838267|PMID:18438418
Molecular Function	GO:0019843	rRNA binding	Eri1	IDA		Mouse	MGI:MGI:3838267|PMID:18438418
Cellular Component	GO:0005737	cytoplasm	ERI1	IDA		Human	PMID:16912046
Cellular Component	GO:0005737	cytoplasm	Eri1	IDA		Mouse	MGI:MGI:3838267|PMID:18438418
Cellular Component	GO:0071204	histone pre-mRNA 3'end processing complex	Eri1	IDA		Mouse	MGI:MGI:4353869|PMID:19470752
Cellular Component	GO:0005730	nucleolus	ERI1	IDA		Human	PMID:16912046
Cellular Component	GO:0005730	nucleolus	Eri1	IDA		Mouse	MGI:MGI:3838267|PMID:18438418
Cellular Component	GO:0005634	nucleus	Eri1	IDA		Mouse	MGI:MGI:3838267|PMID:18438418
Biological Process	GO:0031125	rRNA 3'-end processing	Eri1	IDA		Mouse	MGI:MGI:3838267|PMID:18438418

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern