Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes EPOP
  • Mouse genes Epop
  • Rat genes Epop
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Epop

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003682	chromatin binding	Epop	IDA		Mouse	MGI:MGI:5822935|PMID:27863226
Molecular Function	GO:0003682	chromatin binding	Epop	IDA		Mouse	MGI:MGI:5822936|PMID:27863225
Molecular Function	GO:0005515	protein binding	Epop	IPI	UniProtKB:Q6A4J8	Mouse	MGI:MGI:5822935|PMID:27863226
Molecular Function	GO:0005515	protein binding	Epop	IPI	PR:Q80U70	Mouse	PMID:23180766
Molecular Function	GO:0005515	protein binding	Epop	IPI	PR:Q9D902	Mouse	PMID:23180766
Molecular Function	GO:0005515	protein binding	Epop	IPI	PR:Q921E6	Mouse	PMID:23180766
Molecular Function	GO:0044877	protein-containing complex binding	Epop	IDA		Mouse	MGI:MGI:5822935|PMID:27863226
Cellular Component	GO:0070449	elongin complex	Epop	IDA		Mouse	MGI:MGI:5822936|PMID:27863225
Cellular Component	GO:0035098	ESC/E(Z) complex	Epop	IDA		Mouse	MGI:MGI:5822936|PMID:27863225
Biological Process	GO:0048663	neuron fate commitment	Epop	IDA		Mouse	PMID:23180766
Biological Process	GO:0048663	neuron fate commitment	Epop	IMP		Mouse	PMID:23180766
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	Epop	IDA		Mouse	MGI:MGI:5822935|PMID:27863226
Biological Process	GO:0006357	regulation of transcription by RNA polymerase II	Epop	IMP		Mouse	MGI:MGI:5822936|PMID:27863225
Biological Process	GO:0048863	stem cell differentiation	Epop	IMP		Mouse	MGI:MGI:5822935|PMID:27863226
Biological Process	GO:0048863	stem cell differentiation	Epop	IMP		Mouse	MGI:MGI:5822936|PMID:27863225

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern