Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ELL3
  • Mouse genes Ell3
  • Rat genes Ell3
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ell3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0000987	cis-regulatory region sequence-specific DNA binding	Ell3	IDA		Mouse	MGI:MGI:5448843|PMID:23273992
Molecular Function	GO:0005515	protein binding	ELL3	IPI	UniProtKB:Q96JC9	Human	PMID:21729782
Molecular Function	GO:0005515	protein binding	ELL3	IPI	UniProtKB:Q96JC9	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	ELL3	IPI	UniProtKB:Q96JC9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Ell3	IPI	UniProtKB:Q9ESC8	Mouse	MGI:MGI:5448843|PMID:23273992
Cellular Component	GO:0030054	cell junction	ELL3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005694	chromosome	ELL3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	ELL3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016607	nuclear speck	ELL3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	ELL3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	ELL3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	ELL3	IDA		Human	PMID:10882741
Cellular Component	GO:0005634	nucleus	Ell3	IDA		Mouse	MGI:MGI:5448843|PMID:23273992
Cellular Component	GO:0008023	transcription elongation factor complex	ELL3	IDA		Human	PMID:22195968
Biological Process	GO:0006354	DNA-templated transcription elongation	ELL3	IDA		Human	PMID:10882741
Biological Process	GO:0042771	intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator	Ell3	IMP		Mouse	PMID:22768269
Biological Process	GO:1902166	negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator	Ell3	IMP		Mouse	PMID:22768269
Biological Process	GO:1901797	negative regulation of signal transduction by p53 class mediator	Ell3	IDA		Mouse	PMID:22768269
Biological Process	GO:0061351	neural precursor cell proliferation	Ell3	IDA		Mouse	PMID:22768269
Biological Process	GO:0032786	positive regulation of DNA-templated transcription, elongation	ELL3	IDA		Human	PMID:10882741
Biological Process	GO:2000179	positive regulation of neural precursor cell proliferation	Ell3	IDA		Mouse	PMID:22768269
Biological Process	GO:0050769	positive regulation of neurogenesis	Ell3	IDA		Mouse	PMID:22768269
Biological Process	GO:2000648	positive regulation of stem cell proliferation	Ell3	IDA		Mouse	PMID:22768269
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	ELL3	IDA		Human	PMID:10882741
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Ell3	IMP		Mouse	MGI:MGI:5448843|PMID:23273992
Biological Process	GO:0010717	regulation of epithelial to mesenchymal transition	Ell3	IMP		Mouse	MGI:MGI:5438719|PMID:22768269
Biological Process	GO:0072331	signal transduction by p53 class mediator	Ell3	IDA		Mouse	PMID:22768269
Biological Process	GO:0042795	snRNA transcription by RNA polymerase II	ELL3	IMP		Human	PMID:22195968
Biological Process	GO:0048863	stem cell differentiation	Ell3	IMP		Mouse	MGI:MGI:5438719|PMID:22768269
Biological Process	GO:0048863	stem cell differentiation	Ell3	IMP		Mouse	MGI:MGI:5448843|PMID:23273992
Biological Process	GO:0072089	stem cell proliferation	Ell3	IDA		Mouse	PMID:22768269
Biological Process	GO:0006366	transcription by RNA polymerase II	Ell3	IMP		Mouse	MGI:MGI:5448843|PMID:23273992
Biological Process	GO:0006368	transcription elongation by RNA polymerase II	ELL3	IDA		Human	PMID:10882741

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern