Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ELL
  • Mouse genes Ell
  • Rat genes Ell
  • Zfish genes ell
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ell

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0019902	phosphatase binding	ELL	IDA		Human	PMID:19389623
Molecular Function	GO:0005515	protein binding	ELL	IPI	UniProtKB:P62136	Human	PMID:19389623
Molecular Function	GO:0005515	protein binding	ELL	IPI	UniProtKB:Q96H20	Human	PMID:19819239
Molecular Function	GO:0005515	protein binding	ELL	IPI	UniProtKB:Q659A1	Human	PMID:22195968
Molecular Function	GO:0005515	protein binding	ELL	IPI	UniProtKB:Q9Y2F5	Human	PMID:22195968
Molecular Function	GO:0005515	protein binding	ELL	IPI	UniProtKB:Q9Y2F5	Human	PMID:23932780
Molecular Function	GO:0005515	protein binding	ELL	IPI	UniProtKB:Q5W0Q7	Human	PMID:24413172
Cellular Component	GO:0015030	Cajal body	ELL	IDA		Human	PMID:22195968
Cellular Component	GO:0015030	Cajal body	ELL	IDA		Human	PMID:23932780
Cellular Component	GO:0005829	cytosol	ELL	IDA		Human	GO_REF:0000052
Cellular Component	GO:0000791	euchromatin	ELL	IDA		Human	PMID:23932780
Cellular Component	GO:0035363	histone locus body	ELL	IDA		Human	PMID:23932780
Cellular Component	GO:0016604	nuclear body	ELL	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016607	nuclear speck	ELL	IDA		Human	PMID:19389623
Cellular Component	GO:0005654	nucleoplasm	ELL	IDA		Human	GO_REF:0000052
Cellular Component	GO:0008023	transcription elongation factor complex	ELL	IDA		Human	PMID:22195968
Cellular Component	GO:0008023	transcription elongation factor complex	ELL	IDA		Human	PMID:23932780
Biological Process	GO:0001701	in utero embryonic development	Ell	IMP	MGI:MGI:1933265	Mouse	PMID:11118326
Biological Process	GO:0045945	positive regulation of transcription by RNA polymerase III	ELL	IMP		Human	PMID:23932780
Biological Process	GO:0032968	positive regulation of transcription elongation by RNA polymerase II	ELL	IMP		Human	PMID:23932780
Biological Process	GO:0042795	snRNA transcription by RNA polymerase II	ELL	IMP		Human	PMID:22195968
Biological Process	GO:0042795	snRNA transcription by RNA polymerase II	ELL	IMP		Human	PMID:23932780
Biological Process	GO:0042795	snRNA transcription by RNA polymerase II	Ell	IMP		Mouse	MGI:MGI:5582153|PMID:22195968
Biological Process	GO:0042796	snRNA transcription by RNA polymerase III	ELL	IMP		Human	PMID:23932780
Biological Process	GO:0001570	vasculogenesis	ell	IMP		Zfish	PMID:19447890

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern