Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes EDF1
  • Mouse genes Edf1
  • Rat genes Edf1
  • Zfish genes edf1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Edf1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	EDF1	IPI	UniProtKB:Q13285	Human	PMID:10567391
Molecular Function	GO:0005515	protein binding	EDF1	IPI	UniProtKB:O00482	Human	PMID:12040021
Molecular Function	GO:0005515	protein binding	EDF1	IPI	UniProtKB:P19793	Human	PMID:12040021
Molecular Function	GO:0005515	protein binding	EDF1	IPI	UniProtKB:P20226	Human	PMID:12040021
Molecular Function	GO:0005515	protein binding	EDF1	IPI	UniProtKB:P37231	Human	PMID:12040021
Molecular Function	GO:0005515	protein binding	EDF1	IPI	UniProtKB:Q13133	Human	PMID:12040021
Molecular Function	GO:0005515	protein binding	EDF1	IPI	UniProtKB:P03372	Human	PMID:21217774
Molecular Function	GO:0005515	protein binding	EDF1	IPI	UniProtKB:P03495	Human	PMID:24008843
Molecular Function	GO:0005515	protein binding	EDF1	IPI	UniProtKB:P50222	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	EDF1	IPI	UniProtKB:P03372	Human	PMID:31527615
Molecular Function	GO:0005515	protein binding	EDF1	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0003723	RNA binding	EDF1	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	EDF1	HDA		Human	PMID:22681889
Molecular Function	GO:0001094	TFIID-class transcription factor complex binding	EDF1	IDA		Human	PMID:12040021
Molecular Function	GO:0003713	transcription coactivator activity	EDF1	IMP		Human	PMID:10567391
Molecular Function	GO:0003713	transcription coactivator activity	EDF1	IMP		Human	PMID:12040021
Cellular Component	GO:0005737	cytoplasm	EDF1	IDA		Human	PMID:10567391
Cellular Component	GO:0005829	cytosol	EDF1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	EDF1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	EDF1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	EDF1	IDA		Human	PMID:10567391
Biological Process	GO:0043388	positive regulation of DNA binding	EDF1	IDA		Human	PMID:10567391

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern