Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes DPCD
  • Mouse genes Dpcd
  • Rat genes Dpcd
  • Zfish genes dpcd
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Dpcd

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	DPCD	IPI	UniProtKB:Q9Y230	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	DPCD	IPI	UniProtKB:Q9Y230	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	DPCD	IPI	UniProtKB:Q9Y230	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	DPCD	IPI	UniProtKB:Q9Y230	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Dpcd	IPI	UniProtKB:Q9Y230	Mouse	MGI:MGI:6198825|PMID:29959317
Cellular Component	GO:0005634	nucleus	DPCD	HDA		Human	PMID:21630459
Biological Process	GO:0007368	determination of left/right symmetry	Dpcd	IMP	MGI:MGI:4262238	Mouse	PMID:21746835
Biological Process	GO:0003351	epithelial cilium movement involved in extracellular fluid movement	Dpcd	IMP	MGI:MGI:4262238	Mouse	PMID:21746835
Biological Process	GO:0003351	epithelial cilium movement involved in extracellular fluid movement	Dpcd	IMP		Mouse	PMID:20080492
Biological Process	GO:0051649	establishment of localization in cell	Dpcd	IMP	MGI:MGI:4262238	Mouse	PMID:21746835
Biological Process	GO:0030317	flagellated sperm motility	Dpcd	IMP		Mouse	PMID:20080492
Biological Process	GO:0021670	lateral ventricle development	Dpcd	IMP		Mouse	PMID:20080492
Biological Process	GO:0060972	left/right pattern formation	Dpcd	IMP		Mouse	PMID:20080492
Biological Process	GO:0007283	spermatogenesis	Dpcd	IMP	MGI:MGI:4262238	Mouse	PMID:21746835
Biological Process	GO:0021678	third ventricle development	Dpcd	IMP		Mouse	PMID:20080492
Biological Process	GO:0021591	ventricular system development	Dpcd	IMP	MGI:MGI:4262238	Mouse	PMID:21746835

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern