Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes DMP1
  • Mouse genes Dmp1
  • Rat genes Dmp1
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Dmp1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0050840	extracellular matrix binding	Dmp1	IDA		Mouse	PMID:18757743
Molecular Function	GO:0030544	Hsp70 protein binding	Dmp1	IPI	RGD:2843	Rat	PMID:18757373|RGD:11354920
Cellular Component	GO:0005737	cytoplasm	Dmp1	IDA		Mouse	PMID:32256524
Cellular Component	GO:0031012	extracellular matrix	Dmp1	IDA		Mouse	PMID:19001636
Cellular Component	GO:0031012	extracellular matrix	Dmp1	IDA		Rat	PMID:8509401|RGD:728616
Cellular Component	GO:0005634	nucleus	Dmp1	IDA		Mouse	PMID:32256524
Cellular Component	GO:0005634	nucleus	Dmp1	IDA		Mouse	PMID:19001636
Biological Process	GO:0030198	extracellular matrix organization	Dmp1	IDA		Mouse	PMID:18757743
Biological Process	GO:0010811	positive regulation of cell-substrate adhesion	Dmp1	IDA		Mouse	PMID:18757743
Biological Process	GO:0070173	regulation of enamel mineralization	Dmp1	IDA		Mouse	PMID:16014627

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern