Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes DDX25
  • Mouse genes Ddx25
  • Rat genes Ddx25
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ddx25

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005524	ATP binding	Ddx25	IDA		Mouse	MGI:MGI:1351064|PMID:10608860
Molecular Function	GO:0016887	ATP hydrolysis activity	Ddx25	IDA		Rat	PMID:10608860|RGD:68232
Molecular Function	GO:0005515	protein binding	DDX25	IPI	UniProtKB:Q8NI38	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	DDX25	IPI	UniProtKB:Q9UBB9	Human	PMID:32296183
Molecular Function	GO:0003723	RNA binding	Ddx25	IDA		Rat	PMID:10608860|RGD:68232
Molecular Function	GO:0003724	RNA helicase activity	Ddx25	IDA		Mouse	MGI:MGI:1351064|PMID:10608860
Molecular Function	GO:0003724	RNA helicase activity	Ddx25	IDA		Rat	PMID:10608860|RGD:68232
Cellular Component	GO:0033391	chromatoid body	Ddx25	IDA		Mouse	MGI:MGI:6453518|PMID:32665638
Cellular Component	GO:0033391	chromatoid body	Ddx25	IDA		Mouse	MGI:MGI:3040720|PMID:15096601
Cellular Component	GO:0005737	cytoplasm	Ddx25	IDA		Mouse	MGI:MGI:3696333|PMID:16968703
Cellular Component	GO:0005737	cytoplasm	Ddx25	IDA		Mouse	MGI:MGI:3040720|PMID:15096601
Cellular Component	GO:0005737	cytoplasm	Ddx25	IDA		Rat	PMID:16968703|RGD:8554102
Cellular Component	GO:0005634	nucleus	Ddx25	IDA		Mouse	MGI:MGI:3696333|PMID:16968703
Cellular Component	GO:0005634	nucleus	Ddx25	IDA		Mouse	MGI:MGI:3040720|PMID:15096601
Cellular Component	GO:0005634	nucleus	Ddx25	IDA		Rat	PMID:16968703|RGD:8554102
Biological Process	GO:0006406	mRNA export from nucleus	Ddx25	IDA		Mouse	MGI:MGI:3696333|PMID:16968703
Biological Process	GO:0006417	regulation of translation	Ddx25	IDA		Mouse	MGI:MGI:3696333|PMID:16968703
Biological Process	GO:0007286	spermatid development	Ddx25	IDA		Mouse	MGI:MGI:3040720|PMID:15096601

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern