Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes DDX20
  • Mouse genes Ddx20
  • Rat genes Ddx20
  • Zfish genes ddx20
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ddx20

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0140297	DNA-binding transcription factor binding	DDX20	IPI	UniProtKB:Q8R4Z4	Human	PMID:12007404
Molecular Function	GO:0042826	histone deacetylase binding	Ddx20	IPI	UniProtKB:P70288|UniProtKB:Q9Z2V6	Mouse	MGI:MGI:2178490|PMID:12007404
Molecular Function	GO:0005515	protein binding	DDX20	IPI	UniProtKB:P57678	Human	PMID:11714716
Molecular Function	GO:0005515	protein binding	DDX20	IPI	UniProtKB:Q16637	Human	PMID:11714716
Molecular Function	GO:0005515	protein binding	DDX20	IPI	UniProtKB:Q8TEQ6	Human	PMID:11714716
Molecular Function	GO:0005515	protein binding	DDX20	IPI	UniProtKB:P57678	Human	PMID:17178713
Molecular Function	GO:0005515	protein binding	DDX20	IPI	UniProtKB:Q16637	Human	PMID:17178713
Molecular Function	GO:0005515	protein binding	DDX20	IPI	UniProtKB:Q8TEQ6	Human	PMID:19750007
Molecular Function	GO:0005515	protein binding	DDX20	IPI	UniProtKB:Q16637	Human	PMID:19928837
Molecular Function	GO:0005515	protein binding	DDX20	IPI	UniProtKB:Q16637	Human	PMID:21072240
Molecular Function	GO:0005515	protein binding	DDX20	IPI	UniProtKB:Q8WY41	Human	PMID:21800163
Molecular Function	GO:0005515	protein binding	DDX20	IPI	UniProtKB:P57678	Human	PMID:23752268
Molecular Function	GO:0005515	protein binding	DDX20	IPI	UniProtKB:Q16637	Human	PMID:23752268
Molecular Function	GO:0005515	protein binding	DDX20	IPI	UniProtKB:Q16637	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	DDX20	IPI	UniProtKB:P57678	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	DDX20	IPI	UniProtKB:P57678	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	DDX20	IPI	UniProtKB:O14656-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DDX20	IPI	UniProtKB:P01023	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DDX20	IPI	UniProtKB:P42858	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DDX20	IPI	UniProtKB:P50570-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DDX20	IPI	UniProtKB:P51608	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DDX20	IPI	UniProtKB:Q16637	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	DDX20	IPI	UniProtKB:Q8TB36	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Ddx20	IPI	PR:Q8R4Z4	Mouse	PMID:12007404
Molecular Function	GO:0005515	protein binding	Ddx20	IPI	PR:O88470	Mouse	PMID:16153597
Molecular Function	GO:0019904	protein domain specific binding	Ddx20	IPI	RGD:68494	Rat	PMID:11145740|RGD:632583
Molecular Function	GO:0030674	protein-macromolecule adaptor activity	Ddx20	IDA		Mouse	MGI:MGI:2178490|PMID:12007404
Cellular Component	GO:0005829	cytosol	DDX20	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	DDX20	IDA		Human	PMID:18984161
Cellular Component	GO:0005829	cytosol	DDX20	IDA		Human	PMID:20513430
Cellular Component	GO:0016020	membrane	DDX20	HDA		Human	PMID:19946888
Cellular Component	GO:0016604	nuclear body	DDX20	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	DDX20	IDA		Human	GO_REF:0000052
Cellular Component	GO:0090571	RNA polymerase II transcription repressor complex	Ddx20	IDA		Mouse	MGI:MGI:2178490|PMID:12007404
Cellular Component	GO:0032797	SMN complex	DDX20	IPI		Human	PMID:17178713
Cellular Component	GO:0032797	SMN complex	DDX20	IDA		Human	PMID:17178713
Cellular Component	GO:0032797	SMN complex	DDX20	IDA		Human	PMID:18984161
Cellular Component	GO:0034719	SMN-Sm protein complex	DDX20	IDA		Human	PMID:18984161
Cellular Component	GO:0017053	transcription repressor complex	Ddx20	IDA		Mouse	PMID:12007404
Biological Process	GO:0031101	fin regeneration	ddx20	IMP	ZFIN:ZDB-GENO-210622-18	Zfish	PMID:32218991
Biological Process	GO:0097421	liver regeneration	ddx20	IMP	ZFIN:ZDB-GENO-210622-19	Zfish	PMID:32218991
Biological Process	GO:0008285	negative regulation of cell population proliferation	Ddx20	IGI	UniProtKB:Q8R4Z4	Rat	PMID:12007404|RGD:10047205
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	Ddx20	IDA		Rat	PMID:11145740|RGD:632583
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	DDX20	IDA		Human	PMID:12007404
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Ddx20	IDA		Mouse	PMID:12007404
Biological Process	GO:0070657	neuromast regeneration	ddx20	IMP	ZFIN:ZDB-GENO-210621-5	Zfish	PMID:32218991
Biological Process	GO:0048477	oogenesis	Ddx20	IMP	MGI:MGI:3795148	Mouse	PMID:18258677
Biological Process	GO:0043065	positive regulation of apoptotic process	DDX20	IGI	UniProtKB:P58012	Human	PMID:16153597
Biological Process	GO:0043065	positive regulation of apoptotic process	Ddx20	IMP		Mouse	MGI:MGI:3689799|PMID:16153597
Biological Process	GO:0050810	regulation of steroid biosynthetic process	Ddx20	IMP	MGI:MGI:3795148	Mouse	PMID:18258677
Biological Process	GO:0000387	spliceosomal snRNP assembly	DDX20	EXP		Human	PMID:12067652
Biological Process	GO:0000387	spliceosomal snRNP assembly	DDX20	IDA		Human	PMID:18984161
Biological Process	GO:0042246	tissue regeneration	ddx20	IMP	ZFIN:ZDB-GENO-210622-18	Zfish	PMID:32218991
Biological Process	GO:0042246	tissue regeneration	ddx20	IMP	ZFIN:ZDB-GENO-210621-5	Zfish	PMID:32218991
Biological Process	GO:0042246	tissue regeneration	ddx20	IMP	ZFIN:ZDB-GENO-210622-19	Zfish	PMID:32218991

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern