Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes DDO
  • Mouse genes Ddo
  • Rat genes Ddo
  • Zfish genes ddo
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ddo

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008445	D-aspartate oxidase activity	DDO	IDA		Human	PMID:20603179
Molecular Function	GO:0008445	D-aspartate oxidase activity	Ddo	IDA		Mouse	MGI:MGI:5442503|PMID:20603179
Molecular Function	GO:0071949	FAD binding	DDO	IDA		Human	PMID:20603179
Molecular Function	GO:0071949	FAD binding	Ddo	IDA		Mouse	MGI:MGI:5442503|PMID:20603179
Molecular Function	GO:0005515	protein binding	DDO	IPI	UniProtKB:P50542	Human	PMID:9820813
Cellular Component	GO:0005829	cytosol	DDO	IDA		Human	GO_REF:0000052
Biological Process	GO:0006531	aspartate metabolic process	Ddo	IMP	MGI:MGI:3625623	Mouse	PMID:16525061
Biological Process	GO:0019478	D-amino acid catabolic process	DDO	IDA		Human	PMID:20603179
Biological Process	GO:0019478	D-amino acid catabolic process	Ddo	IDA		Mouse	MGI:MGI:5442503|PMID:20603179
Biological Process	GO:0007625	grooming behavior	Ddo	IMP	MGI:MGI:3625623	Mouse	PMID:16525061
Biological Process	GO:0042445	hormone metabolic process	Ddo	IMP	MGI:MGI:3625623	Mouse	PMID:16525061
Biological Process	GO:0007320	insemination	Ddo	IMP	MGI:MGI:3625623	Mouse	PMID:16525061

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern