Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CYREN
  • Mouse genes Cyren
  • Rat genes Cyren
  • Zfish genes si:ch211-127m7.2
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cyren

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CYREN	IPI	UniProtKB:P12956	Human	PMID:24610814
Molecular Function	GO:0005515	protein binding	CYREN	IPI	UniProtKB:P13010	Human	PMID:24610814
Molecular Function	GO:0005515	protein binding	CYREN	IPI	UniProtKB:P12956	Human	PMID:28959974
Molecular Function	GO:0005515	protein binding	CYREN	IPI	UniProtKB:P13010	Human	PMID:28959974
Molecular Function	GO:0005515	protein binding	CYREN	IPI	UniProtKB:Q5T890	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CYREN	IPI	UniProtKB:Q9UL63	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Cyren	IPI	UniProtKB:P23475|UniProtKB:P27641|UniProtKB:P70388|UniProtKB:Q3KNJ2|UniProtKB:Q61216|UniProtKB:Q62318|UniProtKB:Q9R207	Mouse	MGI:MGI:6202149|PMID:30017584
Cellular Component	GO:0005737	cytoplasm	CYREN	IDA		Human	PMID:24610814
Cellular Component	GO:0005634	nucleus	CYREN	IDA		Human	PMID:24610814
Cellular Component	GO:0035861	site of double-strand break	Cyren	IDA		Mouse	MGI:MGI:6202149|PMID:30017584
Biological Process	GO:0006303	double-strand break repair via nonhomologous end joining	CYREN	IDA		Human	PMID:24610814
Biological Process	GO:0006303	double-strand break repair via nonhomologous end joining	Cyren	IMP		Mouse	MGI:MGI:6202149|PMID:30017584
Biological Process	GO:0033152	immunoglobulin V(D)J recombination	Cyren	IMP		Mouse	MGI:MGI:6716972|PMID:31795137
Biological Process	GO:0033152	immunoglobulin V(D)J recombination	Cyren	IMP		Mouse	MGI:MGI:6202149|PMID:30017584
Biological Process	GO:2001033	negative regulation of double-strand break repair via nonhomologous end joining	CYREN	IDA		Human	PMID:28959974

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern