Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CTDP1
  • Mouse genes Ctdp1
  • Rat genes Ctdp1
  • Zfish genes ctdp1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ctdp1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CTDP1	IPI	UniProtKB:P35269	Human	PMID:12732728
Molecular Function	GO:0005515	protein binding	CTDP1	IPI	UniProtKB:P35269	Human	PMID:9765293
Molecular Function	GO:0005515	protein binding	Ctdp1	IPI	PR:O08740	Mouse	PMID:15226435
Molecular Function	GO:0008420	RNA polymerase II CTD heptapeptide repeat phosphatase activity	CTDP1	IDA		Human	PMID:12721286
Molecular Function	GO:0008420	RNA polymerase II CTD heptapeptide repeat phosphatase activity	CTDP1	IDA		Human	PMID:9765293
Molecular Function	GO:0030957	Tat protein binding	CTDP1	IPI	UniProtKB:P04608	Human	PMID:15723517
Molecular Function	GO:0001096	TFIIF-class transcription factor complex binding	CTDP1	IPI	UniProtKB:P35269	Human	PMID:12732728
Molecular Function	GO:0001096	TFIIF-class transcription factor complex binding	CTDP1	IPI	UniProtKB:P35269	Human	PMID:15723517
Cellular Component	GO:0005813	centrosome	CTDP1	IDA		Human	PMID:22692537
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	CTDP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0030496	midbody	CTDP1	IDA		Human	PMID:22692537
Cellular Component	GO:0005654	nucleoplasm	CTDP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	CTDP1	IDA		Human	PMID:15723517
Cellular Component	GO:0032991	protein-containing complex	CTDP1	IMP		Human	PMID:12732728
Cellular Component	GO:0005819	spindle	CTDP1	IDA		Human	PMID:22692537
Cellular Component	GO:0051233	spindle midzone	CTDP1	IDA		Human	PMID:22692537
Cellular Component	GO:0000922	spindle pole	CTDP1	IDA		Human	PMID:22692537
Biological Process	GO:0010458	exit from mitosis	CTDP1	IMP		Human	PMID:22692537
Biological Process	GO:0061052	negative regulation of cell growth involved in cardiac muscle cell development	Ctdp1	IMP		Rat	PMID:22569295|RGD:9686371
Biological Process	GO:0043923	positive regulation by host of viral transcription	CTDP1	IDA		Human	PMID:15723517
Biological Process	GO:0006470	protein dephosphorylation	CTDP1	IDA		Human	PMID:22692537
Biological Process	GO:0006470	protein dephosphorylation	CTDP1	IDA		Human	PMID:9765293

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern