Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CTDNEP1
  • Mouse genes Ctdnep1
  • Rat genes Ctdnep1
  • Zfish genes ctdnep1a,ctdnep1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ctdnep1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CTDNEP1	IPI	UniProtKB:Q8N9A8	Human	PMID:22134922
Molecular Function	GO:0005515	protein binding	CTDNEP1	IPI	UniProtKB:Q9WH76	Human	PMID:25944354
Molecular Function	GO:0005515	protein binding	CTDNEP1	IPI	UniProtKB:Q9UHD9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Ctdnep1	IPI	PR:Q60838	Mouse	PMID:23469192
Molecular Function	GO:0004722	protein serine/threonine phosphatase activity	CTDNEP1	IMP		Human	PMID:17420445
Cellular Component	GO:0005737	cytoplasm	CTDNEP1	IDA		Human	PMID:22134922
Cellular Component	GO:0005737	cytoplasm	Ctdnep1	IDA		Mouse	PMID:23469192
Cellular Component	GO:0005789	endoplasmic reticulum membrane	CTDNEP1	IDA		Human	PMID:17420445
Cellular Component	GO:0005811	lipid droplet	CTDNEP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0071595	Nem1-Spo7 phosphatase complex	CTDNEP1	IDA		Human	PMID:22134922
Cellular Component	GO:0005635	nuclear envelope	CTDNEP1	IDA		Human	PMID:17420445
Cellular Component	GO:0031965	nuclear membrane	CTDNEP1	IDA		Human	PMID:22134922
Cellular Component	GO:0005634	nucleus	Ctdnep1	IDA		Mouse	PMID:23469192
Biological Process	GO:0060070	canonical Wnt signaling pathway	Ctdnep1	IMP	MGI:MGI:5510826	Mouse	PMID:23469192
Biological Process	GO:0007276	gamete generation	Ctdnep1	IGI	MGI:MGI:98955	Mouse	PMID:23469192
Biological Process	GO:0007276	gamete generation	Ctdnep1	IMP	MGI:MGI:5510826	Mouse	PMID:23469192
Biological Process	GO:0060322	head development	ctdnep1b	IGI	ZFIN:ZDB-MRPHLNO-150213-2,ZFIN:ZDB-MRPHLNO-150213-3	Zfish	PMID:25439725
Biological Process	GO:0060322	head development	ctdnep1b	IGI	ZFIN:ZDB-MRPHLNO-150213-3,ZFIN:ZDB-MRPHLNO-150218-1	Zfish	PMID:25439725
Biological Process	GO:0060322	head development	ctdnep1b	IMP	ZFIN:ZDB-MRPHLNO-150213-3	Zfish	PMID:25439725
Biological Process	GO:0007498	mesoderm development	Ctdnep1	IMP	MGI:MGI:5510826	Mouse	PMID:23469192
Biological Process	GO:0006998	nuclear envelope organization	CTDNEP1	IDA		Human	PMID:17420445
Biological Process	GO:0090263	positive regulation of canonical Wnt signaling pathway	Ctdnep1	IMP	MGI:MGI:5510826	Mouse	PMID:23469192
Biological Process	GO:0010867	positive regulation of triglyceride biosynthetic process	CTDNEP1	IGI		Human	PMID:22134922
Biological Process	GO:0006470	protein dephosphorylation	CTDNEP1	IDA		Human	PMID:17420445
Biological Process	GO:0006470	protein dephosphorylation	CTDNEP1	IDA		Human	PMID:22134922
Biological Process	GO:0034504	protein localization to nucleus	CTDNEP1	IDA		Human	PMID:22134922

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern