Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CSPG5
  • Mouse genes Cspg5
  • Rat genes Cspg5
  • Zfish genes cspg5a,cspg5b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cspg5

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CSPG5	IPI	UniProtKB:Q8BH60	Human	PMID:12885772
Molecular Function	GO:0005515	protein binding	Cspg5	IPI	UniProtKB:P12025	Rat	PMID:16901907|RGD:14397555
Cellular Component	GO:0098982	GABA-ergic synapse	Cspg5	IMP		Mouse	PMID:15848802
Cellular Component	GO:0098982	GABA-ergic synapse	Cspg5	IDA		Mouse	PMID:15848802
Cellular Component	GO:0098978	glutamatergic synapse	Cspg5	IDA		Mouse	PMID:10617623
Cellular Component	GO:0098978	glutamatergic synapse	Cspg5	IDA		Mouse	PMID:15848802
Cellular Component	GO:0098978	glutamatergic synapse	Cspg5	IMP		Mouse	PMID:15848802
Cellular Component	GO:0005794	Golgi apparatus	CSPG5	IDA		Human	PMID:12885772
Cellular Component	GO:0030660	Golgi-associated vesicle membrane	CSPG5	IDA		Human	PMID:12885772
Cellular Component	GO:0045211	postsynaptic membrane	Cspg5	IDA		Mouse	PMID:10617623
Biological Process	GO:0031103	axon regeneration	Cspg5	IEP		Rat	PMID:11069908|RGD:1298825
Biological Process	GO:0007010	cytoskeleton organization	Cspg5	IMP		Rat	PMID:16901907|RGD:14397555
Biological Process	GO:0106091	glial cell projection elongation	Cspg5	IDA		Rat	PMID:16901907|RGD:14397555
Biological Process	GO:0050804	modulation of chemical synaptic transmission	Cspg5	IMP	MGI:MGI:3583953	Mouse	PMID:15848802
Biological Process	GO:1900026	positive regulation of substrate adhesion-dependent cell spreading	Cspg5	IMP		Rat	PMID:16901907|RGD:14397555
Biological Process	GO:2000300	regulation of synaptic vesicle exocytosis	Cspg5	IDA		Mouse	PMID:15848802
Biological Process	GO:2000300	regulation of synaptic vesicle exocytosis	Cspg5	IMP		Mouse	PMID:15848802

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern