Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CPD
  • Mouse genes Cpd
  • Rat genes Cpd
  • Zfish genes cpda,cpdb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cpd

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0051721	protein phosphatase 2A binding	Cpd	IPI	RGD:3380	Rat	PMID:15918796|RGD:8693401
Molecular Function	GO:0044877	protein-containing complex binding	Cpd	IPI	RGD:3380|RGD:62011	Rat	PMID:15918796|RGD:8693401
Cellular Component	GO:0070062	extracellular exosome	CPD	HDA		Human	PMID:19199708
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	Cpd	IDA		Rat	PMID:11181555|RGD:1298782
Cellular Component	GO:0016020	membrane	CPD	HDA		Human	PMID:19946888
Cellular Component	GO:0005634	nucleus	Cpd	IDA		Rat	PMID:11181555|RGD:1298782
Cellular Component	GO:0048471	perinuclear region of cytoplasm	Cpd	IDA		Rat	PMID:15918796|RGD:8693401
Cellular Component	GO:0005802	trans-Golgi network	Cpd	IDA		Rat	PMID:11181555|RGD:1298782
Biological Process	GO:0071352	cellular response to interleukin-2	Cpd	IEP		Rat	PMID:11181555|RGD:1298782

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern