Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes COIL
  • Mouse genes Coil
  • Rat genes Coil
  • Zfish genes coil
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Coil

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0015036	disulfide oxidoreductase activity	Coil	IDA		Mouse	PMID:17284516
Molecular Function	GO:0042802	identical protein binding	COIL	IPI	UniProtKB:P38432	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:P54253	Human	PMID:12757932
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:P54253-1	Human	PMID:12757932
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q7Z6G8-1	Human	PMID:15862129
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q7Z6G8-2	Human	PMID:15862129
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q9Y3D8	Human	PMID:16079131
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:P54253	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:P61289	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q13895	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q8NHQ1	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q8TBB1	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q96HA8	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q9NRD5	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:P12956	Human	PMID:21070772
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:P13010	Human	PMID:21070772
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q16637	Human	PMID:21070772
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q16637	Human	PMID:21072240
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q9BUR4	Human	PMID:21072240
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q99986	Human	PMID:21920476
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q6NT76	Human	PMID:23685356
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:P55081	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:P61328	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:P62306	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:P62875	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q03393	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q08499	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q13895	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q8TBK6	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q8WWA6	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q96EX3	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q96HC4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q9P291	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q9UJX2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q9Y295	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q13895	Human	PMID:27107012
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q96HA8	Human	PMID:27107012
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:P61289	Human	PMID:29934401
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q96HC4	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:A0A024R8L2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:G5E9M4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:O60341	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:O60568	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:O75031	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:P58397-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:P61289	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:P62306	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:P78362	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q08499-8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q13895	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q2TAC2-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q5MJ10	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q6ZUT1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q96EZ8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q96LT7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q9BUI4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:Q9UMS0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	COIL	IPI	UniProtKB:P54253	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Coil	IPI	UniProtKB:Q8BJA3	Mouse	MGI:MGI:5500098|PMID:23685356
Molecular Function	GO:0005515	protein binding	Coil	IPI	PR:Q5SU73	Mouse	PMID:11470819
Molecular Function	GO:0005515	protein binding	Coil	IPI	PR:E9Q5C9	Mouse	PMID:11470819
Cellular Component	GO:0015030	Cajal body	COIL	IDA		Human	PMID:12757932
Cellular Component	GO:0015030	Cajal body	COIL	IDA		Human	PMID:16687569
Cellular Component	GO:0015030	Cajal body	COIL	IDA		Human	PMID:17577209
Cellular Component	GO:0015030	Cajal body	COIL	IDA		Human	PMID:22547674
Cellular Component	GO:0015030	Cajal body	Coil	IDA		Mouse	PMID:11470819
Cellular Component	GO:0015030	Cajal body	Coil	IDA		Mouse	PMID:7768196
Cellular Component	GO:0005829	cytosol	COIL	IDA		Human	GO_REF:0000052
Cellular Component	GO:0001674	female germ cell nucleus	Coil	IDA		Mouse	PMID:7768196
Cellular Component	GO:0001650	fibrillar center	COIL	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016020	membrane	COIL	HDA		Human	PMID:19946888
Cellular Component	GO:0016604	nuclear body	COIL	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	COIL	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	COIL	IDA		Human	PMID:12757932
Cellular Component	GO:0005654	nucleoplasm	COIL	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	COIL	IDA		Human	PMID:12757932
Cellular Component	GO:0005634	nucleus	COIL	IDA		Human	PMID:19734146
Cellular Component	GO:0005634	nucleus	Coil	IDA		Mouse	MGI:MGI:6378068|PMID:28337219
Biological Process	GO:0030576	Cajal body organization	coil	IMP	ZFIN:ZDB-MRPHLNO-100608-7	Zfish	PMID:20357773
Biological Process	GO:0000387	spliceosomal snRNP assembly	coil	IMP	ZFIN:ZDB-MRPHLNO-100608-7	Zfish	PMID:20357773

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern