Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CLPTM1
  • Mouse genes Clptm1
  • Rat genes Clptm1
  • Zfish genes clptm1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Clptm1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0050811	GABA receptor binding	Clptm1	IDA		Mouse	MGI:MGI:6150512|PMID:29395912
Molecular Function	GO:0005515	protein binding	CLPTM1	IPI	UniProtKB:Q8VCW4	Human	PMID:21903422
Cellular Component	GO:0009897	external side of plasma membrane	Clptm1	IDA		Mouse	MGI:MGI:3790269|PMID:7547685
Cellular Component	GO:0098982	GABA-ergic synapse	Clptm1	IDA		Rat	PMID:29395912|RGD:155230763
Cellular Component	GO:0098982	GABA-ergic synapse	Clptm1	IMP		Rat	PMID:29395912|RGD:155230763
Cellular Component	GO:0016020	membrane	CLPTM1	HDA		Human	PMID:19946888
Biological Process	GO:0099072	regulation of postsynaptic membrane neurotransmitter receptor levels	Clptm1	IDA		Rat	PMID:29395912|RGD:155230763
Biological Process	GO:0099072	regulation of postsynaptic membrane neurotransmitter receptor levels	Clptm1	IMP		Rat	PMID:29395912|RGD:155230763
Biological Process	GO:0033081	regulation of T cell differentiation in thymus	Clptm1	IMP		Mouse	MGI:MGI:1095293|PMID:9218588

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern