Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CLIP1
  • Mouse genes Clip1
  • Rat genes Clip1
  • Zfish genes clip1a
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Clip1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008017	microtubule binding	CLIP1	IDA		Human	PMID:17889670
Molecular Function	GO:0008017	microtubule binding	Clip1	IDA		Mouse	MGI:MGI:3663261|PMID:16954346
Molecular Function	GO:0008017	microtubule binding	Clip1	IDA		Mouse	PMID:11290329
Molecular Function	GO:0008017	microtubule binding	Clip1	IDA		Rat	PMID:26972003|RGD:11536928
Molecular Function	GO:0051010	microtubule plus-end binding	CLIP1	IDA		Human	PMID:12433698
Molecular Function	GO:0051010	microtubule plus-end binding	Clip1	IDA		Mouse	PMID:16148041
Molecular Function	GO:0051010	microtubule plus-end binding	Clip1	IDA		Mouse	PMID:16247022
Molecular Function	GO:0051010	microtubule plus-end binding	Clip1	IDA		Rat	PMID:11290329|RGD:68300
Molecular Function	GO:0005515	protein binding	CLIP1	IPI	UniProtKB:P43034	Human	PMID:11940666
Molecular Function	GO:0005515	protein binding	CLIP1	IPI	UniProtKB:P68366	Human	PMID:16455083
Molecular Function	GO:0005515	protein binding	CLIP1	IPI	UniProtKB:Q15691	Human	PMID:16455083
Molecular Function	GO:0005515	protein binding	CLIP1	IPI	UniProtKB:Q14203	Human	PMID:17828275
Molecular Function	GO:0005515	protein binding	CLIP1	IPI	UniProtKB:O00499	Human	PMID:19004523
Molecular Function	GO:0005515	protein binding	CLIP1	IPI	UniProtKB:Q14203	Human	PMID:20679239
Molecular Function	GO:0005515	protein binding	CLIP1	IPI	UniProtKB:Q9P270	Human	PMID:21646404
Molecular Function	GO:0005515	protein binding	CLIP1	IPI	UniProtKB:O00499	Human	PMID:26506308
Molecular Function	GO:0005515	protein binding	CLIP1	IPI	UniProtKB:Q15691	Human	PMID:27173435
Molecular Function	GO:0005515	protein binding	CLIP1	IPI	UniProtKB:Q04864-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Clip1	IPI	PR:Q61166	Mouse	PMID:16148041
Molecular Function	GO:0005515	protein binding	Clip1	IPI	PR:Q8R001	Mouse	PMID:16148041
Molecular Function	GO:0005515	protein binding	Clip1	IPI	PR:P63005	Mouse	PMID:11940666
Molecular Function	GO:0005515	protein binding	Clip1	IPI	PR:Q6PER3	Mouse	PMID:16148041
Molecular Function	GO:0005515	protein binding	Clip1	IPI	PR:Q8BRT1	Mouse	PMID:11290329
Molecular Function	GO:0005515	protein binding	Clip1	IPI	PR:Q80TV8	Mouse	PMID:11290329
Molecular Function	GO:0005515	protein binding	Clip1	IPI	RGD:1322173|RGD:733933|RGD:1322174	Rat	PMID:11290329|RGD:68300
Molecular Function	GO:0005515	protein binding	Clip1	IPI	UniProtKB:Q7Z460	Rat	PMID:11290329|RGD:68300
Molecular Function	GO:0005515	protein binding	Clip1	IPI	UniProtKB:P67870	Rat	PMID:20664522|RGD:11567255
Molecular Function	GO:0005515	protein binding	Clip1	IPI	UniProtKB:Q14203	Rat	PMID:26972003|RGD:11536928
Molecular Function	GO:0015631	tubulin binding	CLIP1	IDA		Human	PMID:17889670
Molecular Function	GO:0008270	zinc ion binding	CLIP1	IDA		Human	PMID:17828275
Cellular Component	GO:0005813	centrosome	CLIP1	IDA		Human	PMID:21399614
Cellular Component	GO:0005881	cytoplasmic microtubule	Clip1	IDA		Rat	PMID:11290329|RGD:68300
Cellular Component	GO:0044354	macropinosome	CLIP1	IDA		Human	PMID:12433698
Cellular Component	GO:0005874	microtubule	CLIP1	IMP		Human	PMID:19004523
Cellular Component	GO:0005874	microtubule	Clip1	IDA		Mouse	MGI:MGI:3828223|PMID:18854161
Cellular Component	GO:0015630	microtubule cytoskeleton	CLIP1	IMP		Human	PMID:17889670
Cellular Component	GO:0015630	microtubule cytoskeleton	Clip1	IDA		Mouse	PMID:11290329
Cellular Component	GO:0035371	microtubule plus-end	CLIP1	IDA		Human	PMID:12433698
Cellular Component	GO:0035371	microtubule plus-end	Clip1	IDA		Mouse	MGI:MGI:3663261|PMID:16954346
Cellular Component	GO:0035371	microtubule plus-end	Clip1	IDA		Rat	PMID:26972003|RGD:11536928
Cellular Component	GO:0005635	nuclear envelope	Clip1	IDA		Mouse	MGI:MGI:5770026|PMID:26506308
Biological Process	GO:0001578	microtubule bundle formation	CLIP1	IMP		Human	PMID:17889670
Biological Process	GO:1900006	positive regulation of dendrite development	Clip1	IMP		Rat	PMID:21430156|RGD:11049556
Biological Process	GO:0031116	positive regulation of microtubule polymerization	CLIP1	IMP		Human	PMID:15262990
Biological Process	GO:0031116	positive regulation of microtubule polymerization	CLIP1	IMP		Human	PMID:17889670
Biological Process	GO:0031116	positive regulation of microtubule polymerization	clip1a	IMP	ZFIN:ZDB-MRPHLNO-131112-1	Zfish	PMID:23955365
Biological Process	GO:0031116	positive regulation of microtubule polymerization	clip1a	IGI	ZFIN:ZDB-MRPHLNO-060301-3,ZFIN:ZDB-MRPHLNO-131112-1	Zfish	PMID:23955365
Biological Process	GO:0044861	protein transport into plasma membrane raft	Clip1	IMP		Mouse	PMID:18511518

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern