Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CHRDL1
  • Mouse genes Chrdl1
  • Rat genes Chrdl1
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Chrdl1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0036122	BMP binding	Chrdl1	IDA		Mouse	PMID:11401399
Molecular Function	GO:0050431	transforming growth factor beta binding	Chrdl1	IDA		Mouse	PMID:11401399
Cellular Component	GO:0005576	extracellular region	Chrdl1	IDA		Mouse	PMID:30344043
Biological Process	GO:0097113	AMPA glutamate receptor clustering	Chrdl1	IMP	MGI:MGI:6315865	Mouse	PMID:30344043
Biological Process	GO:0030509	BMP signaling pathway	Chrdl1	IMP	MGI:MGI:6315865	Mouse	PMID:30344043
Biological Process	GO:0001709	cell fate determination	Chrdl1	IMP		Rat	PMID:14684875|RGD:1299653
Biological Process	GO:0000578	embryonic axis specification	Chrdl1	IDA		Mouse	PMID:11401399
Biological Process	GO:0000578	embryonic axis specification	Chrdl1	IDA		Mouse	PMID:11118896
Biological Process	GO:0098976	excitatory chemical synaptic transmission	Chrdl1	IMP	MGI:MGI:6315865	Mouse	PMID:30344043
Biological Process	GO:0001654	eye development	CHRDL1	IMP		Human	PMID:22284829
Biological Process	GO:0030514	negative regulation of BMP signaling pathway	Chrdl1	IDA		Mouse	PMID:11401399
Biological Process	GO:0030514	negative regulation of BMP signaling pathway	Chrdl1	IDA		Mouse	PMID:23676271
Biological Process	GO:0030182	neuron differentiation	Chrdl1	IMP		Rat	PMID:14684875|RGD:1299653
Biological Process	GO:0048167	regulation of synaptic plasticity	Chrdl1	IMP	MGI:MGI:6315865	Mouse	PMID:30344043
Biological Process	GO:0060074	synapse maturation	Chrdl1	IMP	MGI:MGI:6315865	Mouse	PMID:30344043

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern