Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CHPF
  • Mouse genes Chpf
  • Rat genes Chpf
  • Zfish genes chpfa,chpfb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Chpf

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0047238	glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity	CHPF	IDA		Human	PMID:12761225
Molecular Function	GO:0047238	glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity	Chpf	IGI	MGI:MGI:1926173	Mouse	PMID:17253960
Molecular Function	GO:0047238	glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase activity	Chpf	IGI	MGI:MGI:2681120	Mouse	PMID:22952769
Molecular Function	GO:0016757	glycosyltransferase activity	Chpf	IMP	MGI:MGI:5464019	Mouse	PMID:22952769
Molecular Function	GO:0050510	N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity	CHPF	IDA		Human	PMID:12761225
Molecular Function	GO:0050510	N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity	Chpf	IGI	MGI:MGI:1926173	Mouse	PMID:17253960
Molecular Function	GO:0050510	N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase activity	Chpf	IGI	MGI:MGI:2681120	Mouse	PMID:22952769
Molecular Function	GO:0005515	protein binding	Chpf	IPI	UniProtKB:Q9WVS6	Mouse	MGI:MGI:5306701|PMID:22082830
Cellular Component	GO:0005794	Golgi apparatus	Chpf	IDA		Mouse	PMID:6781479
Biological Process	GO:0030206	chondroitin sulfate biosynthetic process	CHPF	IDA		Human	PMID:12761225
Biological Process	GO:0030206	chondroitin sulfate biosynthetic process	Chpf	IGI	MGI:MGI:2681120	Mouse	PMID:22952769
Biological Process	GO:0030206	chondroitin sulfate biosynthetic process	Chpf	IGI	MGI:MGI:1926173	Mouse	PMID:17253960
Biological Process	GO:0030206	chondroitin sulfate biosynthetic process	Chpf	IMP	MGI:MGI:5464019	Mouse	PMID:22952769
Biological Process	GO:0030206	chondroitin sulfate biosynthetic process	Chpf	IGI	MGI:MGI:2681120	Mouse	PMID:22952873

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern