Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CHODL
  • Mouse genes Chodl
  • Rat genes Chodl
  • Zfish genes chodl
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Chodl

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CHODL	IPI	UniProtKB:O14523	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CHODL	IPI	UniProtKB:O95968	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CHODL	IPI	UniProtKB:P24593	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CHODL	IPI	UniProtKB:Q07325	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CHODL	IPI	UniProtKB:Q12982	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CHODL	IPI	UniProtKB:Q15125	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CHODL	IPI	UniProtKB:Q8IVQ6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CHODL	IPI	UniProtKB:Q92843	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CHODL	IPI	UniProtKB:Q9NZG7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CHODL	IPI	UniProtKB:Q9UPQ8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Chodl	IPI	UniProtKB:P53612	Mouse	MGI:MGI:5905270|PMID:18161010
Cellular Component	GO:0005813	centrosome	CHODL	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005737	cytoplasm	CHODL	IDA		Human	PMID:22042635
Cellular Component	GO:0005829	cytosol	CHODL	IDA		Human	GO_REF:0000052
Cellular Component	GO:0048471	perinuclear region of cytoplasm	CHODL	IDA		Human	PMID:12079284
Biological Process	GO:0007409	axonogenesis	chodl	IMP	ZFIN:ZDB-FISH-201111-1	Zfish	PMID:31665626
Biological Process	GO:0007409	axonogenesis	chodl	IMP	ZFIN:ZDB-MRPHLNO-120412-1,ZFIN:ZDB-MRPHLNO-120412-2	Zfish	PMID:22457492
Biological Process	GO:0007409	axonogenesis	chodl	IMP	ZFIN:ZDB-MRPHLNO-120412-3	Zfish	PMID:22457492
Biological Process	GO:0008045	motor neuron axon guidance	chodl	IGI	ZFIN:ZDB-MRPHLNO-051026-3	Zfish	PMID:24067532
Biological Process	GO:0050772	positive regulation of axonogenesis	chodl	IGI	ZFIN:ZDB-MRPHLNO-051026-3	Zfish	PMID:24067532
Biological Process	GO:0010975	regulation of neuron projection development	Chodl	IGI	MGI:MGI:109257	Mouse	PMID:24067532
Biological Process	GO:0060386	synapse assembly involved in innervation	chodl	IMP	ZFIN:ZDB-FISH-201111-1	Zfish	PMID:31665626

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern