Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CHERP
  • Mouse genes Cherp
  • Rat genes Cherp
  • Zfish genes cherp
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cherp

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CHERP	IPI	UniProtKB:P26368	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	CHERP	IPI	UniProtKB:Q14562	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	CHERP	IPI	UniProtKB:Q70Z53	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	CHERP	IPI	UniProtKB:Q8WVK2	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	CHERP	IPI	UniProtKB:Q9NQ29	Human	PMID:22365833
Molecular Function	GO:0005515	protein binding	CHERP	IPI	UniProtKB:Q15637	Human	PMID:26420826
Molecular Function	GO:0005515	protein binding	CHERP	IPI	UniProtKB:O43251-10	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CHERP	IPI	UniProtKB:O60504	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CHERP	IPI	UniProtKB:P49761	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CHERP	IPI	UniProtKB:Q04726-4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CHERP	IPI	UniProtKB:Q14296	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CHERP	IPI	UniProtKB:Q14847-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CHERP	IPI	UniProtKB:Q5HY92	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CHERP	IPI	UniProtKB:Q6P1W5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CHERP	IPI	UniProtKB:Q6UY14-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CHERP	IPI	UniProtKB:Q70EL1-9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CHERP	IPI	UniProtKB:Q8IUC1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CHERP	IPI	UniProtKB:Q8IYX7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CHERP	IPI	UniProtKB:Q9Y5V3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Cherp	IPI	UniProtKB:Q15637	Mouse	MGI:MGI:5700260|PMID:26420826
Molecular Function	GO:0003723	RNA binding	CHERP	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	CHERP	HDA		Human	PMID:22681889
Molecular Function	GO:0044325	transmembrane transporter binding	CHERP	IPI	UniProtKB:P11716	Human	PMID:21454501
Cellular Component	GO:0005737	cytoplasm	CHERP	IDA		Human	PMID:10794731
Cellular Component	GO:0005737	cytoplasm	CHERP	IDA		Human	PMID:12656674
Cellular Component	GO:0016020	membrane	CHERP	HDA		Human	PMID:19946888
Cellular Component	GO:0048471	perinuclear region of cytoplasm	CHERP	IDA		Human	PMID:12656674
Cellular Component	GO:0033017	sarcoplasmic reticulum membrane	Cherp	IDA		Rat	PMID:21454501|RGD:8554079
Biological Process	GO:0006874	intracellular calcium ion homeostasis	CHERP	IDA		Human	PMID:10794731
Biological Process	GO:0008285	negative regulation of cell population proliferation	CHERP	IDA		Human	PMID:10794731
Biological Process	GO:0070886	positive regulation of calcineurin-NFAT signaling cascade	CHERP	IMP		Human	PMID:12656674
Biological Process	GO:0051209	release of sequestered calcium ion into cytosol	CHERP	IMP		Human	PMID:12656674

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern