Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CHAF1B
  • Mouse genes Chaf1b
  • Rat genes Chaf1b
  • Zfish genes chaf1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Chaf1b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CHAF1B	IPI	UniProtKB:Q9NVP2	Human	PMID:16980972
Molecular Function	GO:0005515	protein binding	CHAF1B	IPI	UniProtKB:Q9Y294	Human	PMID:16980972
Molecular Function	GO:0005515	protein binding	CHAF1B	IPI	UniProtKB:Q9Y294	Human	PMID:24981860
Molecular Function	GO:0005515	protein binding	CHAF1B	IPI	UniProtKB:Q9NVP2	Human	PMID:27705803
Molecular Function	GO:0005515	protein binding	CHAF1B	IPI	UniProtKB:Q9NVP2	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	Chaf1b	IPI	PR:Q8VEG6	Mouse	PMID:17452450
Cellular Component	GO:0033186	CAF-1 complex	CHAF1B	IPI		Human	PMID:9614144
Cellular Component	GO:0033186	CAF-1 complex	CHAF1B	IDA		Human	PMID:8858152
Cellular Component	GO:0000785	chromatin	CHAF1B	IDA		Human	PMID:14718166
Cellular Component	GO:0000785	chromatin	CHAF1B	IDA		Human	PMID:9614144
Cellular Component	GO:0005829	cytosol	CHAF1B	HDA		Human	PMID:16780588
Cellular Component	GO:0005654	nucleoplasm	CHAF1B	HDA		Human	PMID:16780588
Cellular Component	GO:0005654	nucleoplasm	CHAF1B	IDA		Human	GO_REF:0000052
Cellular Component	GO:0032991	protein-containing complex	CHAF1B	IDA		Human	PMID:14718166
Biological Process	GO:0006335	DNA replication-dependent chromatin assembly	CHAF1B	IDA		Human	PMID:8858152
Biological Process	GO:0006335	DNA replication-dependent chromatin assembly	CHAF1B	IDA		Human	PMID:9614144
Biological Process	GO:0048568	embryonic organ development	chaf1b	IMP	ZFIN:ZDB-GENO-080609-1	Zfish	PMID:18156805
Biological Process	GO:0000278	mitotic cell cycle	chaf1b	IMP	ZFIN:ZDB-GENO-080609-1	Zfish	PMID:18156805
Biological Process	GO:0006334	nucleosome assembly	CHAF1B	IDA		Human	PMID:14718166
Biological Process	GO:0060041	retina development in camera-type eye	chaf1b	IMP	ZFIN:ZDB-GENO-080609-1	Zfish	PMID:18156805

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern