Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CGGBP1
  • Mouse genes Cggbp1
  • Rat genes Cggbp1
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cggbp1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0140297	DNA-binding transcription factor binding	CGGBP1	IPI	UniProtKB:P49711	Human	PMID:31547883
Molecular Function	GO:0003690	double-stranded DNA binding	CGGBP1	IDA		Human	PMID:31547883
Molecular Function	GO:0042802	identical protein binding	CGGBP1	IPI	UniProtKB:Q9UFW8	Human	PMID:25416956
Molecular Function	GO:0042802	identical protein binding	CGGBP1	IPI	UniProtKB:Q9UFW8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CGGBP1	IPI	UniProtKB:O00560	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CGGBP1	IPI	UniProtKB:O76003	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CGGBP1	IPI	UniProtKB:Q04864	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CGGBP1	IPI	UniProtKB:Q86V42	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	CGGBP1	IPI	UniProtKB:Q6IN84	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	CGGBP1	IPI	UniProtKB:Q04864	Human	PMID:29892012
Molecular Function	GO:0005515	protein binding	CGGBP1	IPI	UniProtKB:A0A087WZT3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CGGBP1	IPI	UniProtKB:O15160	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CGGBP1	IPI	UniProtKB:O75928-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CGGBP1	IPI	UniProtKB:P26367	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CGGBP1	IPI	UniProtKB:P55273	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CGGBP1	IPI	UniProtKB:Q04864-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CGGBP1	IPI	UniProtKB:Q16543	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CGGBP1	IPI	UniProtKB:Q6IN84	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CGGBP1	IPI	UniProtKB:Q96HA8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CGGBP1	IPI	UniProtKB:Q99757	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CGGBP1	IPI	UniProtKB:Q9H8Y8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CGGBP1	IPI	UniProtKB:Q9NRD5	Human	PMID:32296183
Cellular Component	GO:0005654	nucleoplasm	CGGBP1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	CGGBP1	IDA		Human	GO_REF:0000054
Biological Process	GO:0040029	epigenetic regulation of gene expression	CGGBP1	IDA		Human	PMID:31547883
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	CGGBP1	IDA		Human	PMID:10692448

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern