Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CDHR1
  • Mouse genes Cdhr1
  • Rat genes Cdhr1
  • Zfish genes cdhr1a
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cdhr1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Cdhr1	IPI	UniProtKB:O43490	Mouse	MGI:MGI:3814988|PMID:18654668
Cellular Component	GO:0042622	photoreceptor outer segment membrane	Cdhr1	IDA		Mouse	MGI:MGI:3814988|PMID:18654668
Cellular Component	GO:0005886	plasma membrane	Cdhr1	IDA		Mouse	PMID:11738025
Biological Process	GO:0021782	glial cell development	cdhr1a	IMP	ZFIN:ZDB-CRISPR-191008-5,ZFIN:ZDB-CRISPR-191008-6	Zfish	PMID:30924555
Biological Process	GO:0045494	photoreceptor cell maintenance	CDHR1	IMP		Human	PMID:20805371
Biological Process	GO:0045494	photoreceptor cell maintenance	Cdhr1	IMP	MGI:MGI:3046299	Mouse	PMID:11738025
Biological Process	GO:0008594	photoreceptor cell morphogenesis	CDHR1	IMP		Human	PMID:23044944
Biological Process	GO:0035845	photoreceptor cell outer segment organization	CDHR1	IMP		Human	PMID:23044944
Biological Process	GO:0060041	retina development in camera-type eye	cdhr1a	IMP	ZFIN:ZDB-CRISPR-191008-5,ZFIN:ZDB-CRISPR-191008-6	Zfish	PMID:30924555

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern