Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CDH4
  • Mouse genes Cdh4
  • Rat genes Cdh4
  • Zfish genes cdh4
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cdh4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Cellular Component	GO:0005886	plasma membrane	CDH4	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	Cdh4	IDA		Mouse	PMID:8270638
Biological Process	GO:0048675	axon extension	Cdh4	IDA		Mouse	PMID:14586016
Biological Process	GO:0007411	axon guidance	Cdh4	IDA		Mouse	PMID:14586016
Biological Process	GO:0048593	camera-type eye morphogenesis	cdh4	IMP	ZFIN:ZDB-MRPHLNO-050930-2	Zfish	PMID:15918170
Biological Process	GO:0048593	camera-type eye morphogenesis	cdh4	IMP	ZFIN:ZDB-MRPHLNO-050930-3	Zfish	PMID:15918170
Biological Process	GO:0021545	cranial nerve development	cdh4	IMP	ZFIN:ZDB-MRPHLNO-050930-2	Zfish	PMID:17279575
Biological Process	GO:0021545	cranial nerve development	cdh4	IMP	ZFIN:ZDB-MRPHLNO-050930-3	Zfish	PMID:17279575
Biological Process	GO:0007157	heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules	Cdh4	IDA		Mouse	PMID:8270638
Biological Process	GO:0007156	homophilic cell adhesion via plasma membrane adhesion molecules	Cdh4	IDA		Mouse	PMID:8270638
Biological Process	GO:0048925	lateral line system development	cdh4	IMP	ZFIN:ZDB-MRPHLNO-050930-3	Zfish	PMID:17279575
Biological Process	GO:0048925	lateral line system development	cdh4	IMP	ZFIN:ZDB-MRPHLNO-050930-2	Zfish	PMID:17279575
Biological Process	GO:0045773	positive regulation of axon extension	Cdh4	IDA		Mouse	PMID:14586016
Biological Process	GO:0042478	regulation of eye photoreceptor cell development	cdh4	IMP	ZFIN:ZDB-MRPHLNO-050930-2	Zfish	PMID:17070801
Biological Process	GO:0060042	retina morphogenesis in camera-type eye	cdh4	IMP	ZFIN:ZDB-MRPHLNO-050930-2	Zfish	PMID:17070801

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern