Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CD248
  • Mouse genes Cd248
  • Rat genes Cd248
  • Zfish genes cd248a,cd248b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Cd248

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0050840	extracellular matrix binding	Cd248	IDA		Mouse	PMID:22740442
Molecular Function	GO:0005515	protein binding	CD248	IPI	UniProtKB:O14901	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	CD248	IPI	UniProtKB:P27361	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	CD248	IPI	UniProtKB:P46379-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	CD248	IPI	UniProtKB:Q13449	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	CD248	IPI	UniProtKB:Q9UMF0	Human	PMID:32814053
Cellular Component	GO:0005737	cytoplasm	Cd248	IDA		Mouse	PMID:11489895
Cellular Component	GO:0070062	extracellular exosome	CD248	HDA		Human	PMID:23533145
Biological Process	GO:0060033	anatomical structure regression	Cd248	IMP	MGI:MGI:3625491	Mouse	PMID:22740442
Biological Process	GO:0072577	endothelial cell apoptotic process	Cd248	IMP	MGI:MGI:3625491	Mouse	PMID:22740442
Biological Process	GO:0010761	fibroblast migration	Cd248	IMP	MGI:MGI:3625491	Mouse	PMID:20432232
Biological Process	GO:0048144	fibroblast proliferation	Cd248	IMP	MGI:MGI:3625491	Mouse	PMID:20432232
Biological Process	GO:0048535	lymph node development	Cd248	IMP	MGI:MGI:3625491	Mouse	PMID:20432232
Biological Process	GO:2000353	positive regulation of endothelial cell apoptotic process	Cd248	IMP	MGI:MGI:3625491	Mouse	PMID:22740442
Biological Process	GO:0048146	positive regulation of fibroblast proliferation	Cd248	IMP	MGI:MGI:3625491	Mouse	PMID:20432232

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern