Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CCSAP
  • Mouse genes Ccsap
  • Rat genes Ccsap
  • Zfish genes ccsapa,ccsapb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ccsap

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0008017	microtubule binding	CCSAP	IDA		Human	PMID:26562023
Cellular Component	GO:0030424	axon	CCSAP	IDA		Human	PMID:22493317
Cellular Component	GO:0005930	axoneme	CCSAP	IDA		Human	PMID:22493317
Cellular Component	GO:0005814	centriole	CCSAP	IDA		Human	PMID:22493317
Cellular Component	GO:0005813	centrosome	CCSAP	IDA		Human	PMID:21399614
Cellular Component	GO:0005813	centrosome	CCSAP	IDA		Human	PMID:26562023
Cellular Component	GO:0036064	ciliary basal body	CCSAP	IDA		Human	PMID:22493317
Cellular Component	GO:0036064	ciliary basal body	ccsapb	IDA		Zfish	PMID:22493317
Cellular Component	GO:0035869	ciliary transition zone	CCSAP	IDA		Human	PMID:22493317
Cellular Component	GO:0005929	cilium	CCSAP	IDA		Human	PMID:22493317
Cellular Component	GO:0072686	mitotic spindle	CCSAP	IDA		Human	PMID:26562023
Cellular Component	GO:0061673	mitotic spindle astral microtubule	CCSAP	IDA		Human	PMID:26562023
Cellular Component	GO:0005819	spindle	CCSAP	IDA		Human	PMID:22493317
Biological Process	GO:0007420	brain development	ccsapb	IDA		Zfish	PMID:22493317|ZFIN:ZDB-PUB-120412-14
Biological Process	GO:0007420	brain development	ccsapb	IMP	ZFIN:ZDB-MRPHLNO-120611-2	Zfish	PMID:22493317
Biological Process	GO:0003341	cilium movement	ccsapb	IMP	ZFIN:ZDB-MRPHLNO-120611-2	Zfish	PMID:22493317
Biological Process	GO:0061371	determination of heart left/right asymmetry	ccsapb	IDA		Zfish	PMID:22493317|ZFIN:ZDB-PUB-120412-14
Biological Process	GO:0061371	determination of heart left/right asymmetry	ccsapb	IMP	ZFIN:ZDB-MRPHLNO-120611-2	Zfish	PMID:22493317
Biological Process	GO:0007507	heart development	ccsapb	IDA		Zfish	PMID:22493317|ZFIN:ZDB-PUB-120412-14
Biological Process	GO:1990755	mitotic spindle microtubule depolymerization	CCSAP	IDA		Human	PMID:26562023
Biological Process	GO:0060548	negative regulation of cell death	ccsapb	IMP		Zfish	PMID:22493317|ZFIN:ZDB-PUB-120412-14
Biological Process	GO:0045930	negative regulation of mitotic cell cycle	ccsapb	IMP		Zfish	PMID:22493317|ZFIN:ZDB-PUB-120412-14
Biological Process	GO:0048666	neuron development	ccsapb	IMP		Zfish	PMID:22493317|ZFIN:ZDB-PUB-120412-14
Biological Process	GO:0060296	regulation of cilium beat frequency involved in ciliary motility	ccsapb	IMP		Zfish	PMID:22493317|ZFIN:ZDB-PUB-120412-14
Biological Process	GO:0045995	regulation of embryonic development	ccsapb	IDA		Zfish	PMID:22493317|ZFIN:ZDB-PUB-120412-14
Biological Process	GO:1901673	regulation of mitotic spindle assembly	CCSAP	IMP		Human	PMID:26562023

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern