Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CCDC88B
  • Mouse genes Ccdc88b
  • Rat genes Ccdc88b
  • Zfish genes ccdc88b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ccdc88b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:O60941-5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:O75604	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:P08631-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:P09067	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:P20700	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:P25800	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:P55040	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q03252	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q07002	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q13526	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q15311	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q2TBE0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q3B820	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q3SY00	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q53FD0-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q63ZY3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q6NUQ1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q6NYC8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q8N3L3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q8TBB1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q8TD31-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q96AA8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q96B97	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q96MY7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q99816	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q9BXY8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q9BZW7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q9H257-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q9H4E7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q9H788	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q9NQT4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q9NRE2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q9NU19	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q9NX04	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q9Y228	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q9Y580	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC88B	IPI	UniProtKB:Q9Y5B8	Human	PMID:32296183
Cellular Component	GO:0005813	centrosome	CCDC88B	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005829	cytosol	CCDC88B	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016020	membrane	CCDC88B	HDA		Human	PMID:19946888
Cellular Component	GO:0016020	membrane	Ccdc88b	IDA		Mouse	MGI:MGI:5763360|PMID:25403443
Cellular Component	GO:0005654	nucleoplasm	CCDC88B	IDA		Human	GO_REF:0000052
Biological Process	GO:0042832	defense response to protozoan	Ccdc88b	IMP		Mouse	MGI:MGI:5763360|PMID:25403443
Biological Process	GO:0001819	positive regulation of cytokine production	Ccdc88b	IMP		Mouse	MGI:MGI:5763360|PMID:25403443
Biological Process	GO:0050870	positive regulation of T cell activation	Ccdc88b	IMP		Mouse	MGI:MGI:5763360|PMID:25403443
Biological Process	GO:0042102	positive regulation of T cell proliferation	Ccdc88b	IMP		Mouse	MGI:MGI:5763360|PMID:25403443

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern