Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CCDC50
  • Mouse genes Ccdc50
  • Rat genes Ccdc50
  • Zfish genes ccdc50a,ccdc50b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ccdc50

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CCDC50	IPI	UniProtKB:P0CG47	Human	PMID:18029035
Molecular Function	GO:0005515	protein binding	CCDC50	IPI	UniProtKB:Q13546	Human	PMID:18029035
Molecular Function	GO:0005515	protein binding	CCDC50	IPI	UniProtKB:Q6GQQ9	Human	PMID:18029035
Molecular Function	GO:0005515	protein binding	CCDC50	IPI	UniProtKB:O76064	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC50	IPI	UniProtKB:Q96B67	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC50	IPI	UniProtKB:Q99961	Human	PMID:32296183
Molecular Function	GO:0031625	ubiquitin protein ligase binding	CCDC50	IPI	UniProtKB:Q91YL2	Human	PMID:23418353
Cellular Component	GO:0005829	cytosol	CCDC50	IDA		Human	GO_REF:0000052
Cellular Component	GO:0015630	microtubule cytoskeleton	Ccdc50	IDA		Mouse	PMID:17503326
Biological Process	GO:0007605	sensory perception of sound	CCDC50	IMP		Human	PMID:17503326

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern