Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes CCDC115
  • Mouse genes Ccdc115
  • Rat genes Ccdc115
  • Zfish genes ccdc115
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ccdc115

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	CCDC115	IPI	UniProtKB:O15296	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC115	IPI	UniProtKB:P54136	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC115	IPI	UniProtKB:Q96HA8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC115	IPI	UniProtKB:Q9NYB9-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	CCDC115	IPI	UniProtKB:Q9NYP9	Human	PMID:32296183
Cellular Component	GO:0030137	COPI-coated vesicle	CCDC115	IDA		Human	PMID:26833332
Cellular Component	GO:0005783	endoplasmic reticulum	CCDC115	IDA		Human	PMID:28296633
Cellular Component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	CCDC115	IDA		Human	PMID:26833332
Cellular Component	GO:0005764	lysosome	Ccdc115	IDA		Mouse	PMID:16378758
Cellular Component	GO:0016020	membrane	CCDC115	HDA		Human	PMID:19946888
Cellular Component	GO:0016471	vacuolar proton-transporting V-type ATPase complex	CCDC115	IDA		Human	PMID:28296633
Biological Process	GO:0036295	cellular response to increased oxygen levels	CCDC115	IMP		Human	PMID:28296633
Biological Process	GO:0006879	intracellular iron ion homeostasis	CCDC115	IMP		Human	PMID:28296633
Biological Process	GO:0007042	lysosomal lumen acidification	CCDC115	IMP		Human	PMID:28296633
Biological Process	GO:1905146	lysosomal protein catabolic process	CCDC115	IMP		Human	PMID:28296633

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern